| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3948 |
|---|
| Symbol | |
|---|
| ID | 3715252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4475507 |
|---|
| End bp | 4476664 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_349676 |
|---|
| Protein GI | 77460169 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.54725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCA CCCCGGAACA CGAAGCTCTG CGCCGCACCG TCCGCCAGTT CGTCGAGCAC
GAGATCAACC CCCATGTCGA TGAATGGGAA AAGGCCGGGC GCTTTCCGAT CCACGAGATT
TTCCGCAAGG CCGGCGACCT CGGTCTGCTG GGGATTTCCA AGCCGGAAAA ATTCGGCGGC
ATGGGTCTGG ATTACAGCTA TTCGATCGTC GCGGCCGAAG AGTTCGGCAC CATCCACTGC
GGCGGCATTC CGATGTCGAT CGGCGTGCAG ACCGACATGT GCACTCCGGC CCTCGCCCGC
TTCGGTTCCG ATGAGTTGCG CGAAGAGTTT CTGCGCCCAG CCATCACTGG CGAGCAGGTC
GGCTGCATCG GTGTCTCGGA AGTCGGCGCC GGCTCCGATG TCGCCGGGCT CAAGACCACC
GCGCGCAAGG ATGGCGACGA CTATGTGATC AACGGCAGCA AGATGTGGAT CACCAACTCG
CCGAGCGCCG ACTTCATCTG CCTGCTGGCC AACACCTCGG ACGACAAGCC GCACATCAAC
AAATCGCTGA TCATGGTGCC GATGAACACG CCGGGTATCA GCCTCAGTTC GCACCTGGAC
AAGCTCGGCA TGCGCAGCTC GGAAACCGCC CAGGTGTTTT TCGACAACGT GCGCGTGCCC
CAGCGCAATC GCATCGGCCA CGAAGGCGCC GGGTTCATGA TGCAGATGCT GCAGTTCCAG
GAGGAACGCC TGTTCGGTGC GGCCAACATG ATCAAGGGCC TGGAATACTG CGTCGACAGC
ACCATCGAGT ACTGCAAGGA GCGCAAGACC TTCGGCAACG CGCTGATCGA CAATCAGGTG
ATTCACTTCC GCCTCGCCGA GTTGCAGACC GAAATCGAAT GCCTGCGGGC GCTGGTCTAT
CAGGCCACCG AGCAATACGT CAAAGGCCAG GACGTCACCC GACTGGCGTC GATGGCCAAG
CTCAAGGCCG GACGTCTCGG TCGGGAAGTC AGCGACAGTT GCCTGCAATA CTGGGGCGGC
ATGGGCTTCA TGTGGGACAA CCCGGTGGCC CGCGCCTACC GCGACGTGCG GCTGGTATCG
ATTGGCGGCG GCGCCGATGA AATCATGCTG GGGATCATCT GCAAACTGAT GGGCATTCTG
CCGGGGAAAA AGAAATGA
|
|---|
| Protein sequence | MIFTPEHEAL RRTVRQFVEH EINPHVDEWE KAGRFPIHEI FRKAGDLGLL GISKPEKFGG
MGLDYSYSIV AAEEFGTIHC GGIPMSIGVQ TDMCTPALAR FGSDELREEF LRPAITGEQV
GCIGVSEVGA GSDVAGLKTT ARKDGDDYVI NGSKMWITNS PSADFICLLA NTSDDKPHIN
KSLIMVPMNT PGISLSSHLD KLGMRSSETA QVFFDNVRVP QRNRIGHEGA GFMMQMLQFQ
EERLFGAANM IKGLEYCVDS TIEYCKERKT FGNALIDNQV IHFRLAELQT EIECLRALVY
QATEQYVKGQ DVTRLASMAK LKAGRLGREV SDSCLQYWGG MGFMWDNPVA RAYRDVRLVS
IGGGADEIML GIICKLMGIL PGKKK
|
|---|
| |