| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0669 |
|---|
| Symbol | |
|---|
| ID | 5150725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 680251 |
|---|
| End bp | 681420 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640555671 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001236843 |
|---|
| Protein GI | 148252258 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.282449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0349391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTCA CCGCCGACCA CGACGAACCG CGCCGCATCC TGCAGAAGTT CATCGCTGCC
GAGATCAACC CTCACGTCGA CGAATGGGAG GCGGCCGGCA TCTTCCCCGC GCATGAGCTG
TTCAAGAAGC TTGGCAGCCT CGGCTTTCTC GGCCTCAACA AGCCGGTCGA ATTCGGCGGC
CAGGGGCTGG ACTATTCCTA CGCGCTGATG ATGGCCGAGG AGCTTGGCGC GATCACTTGC
GGCGGCGTGC CGATGGCGAT CGGGGTGCAG ACCGACATGG CGACGCCGGC GCTGGCGCGC
TTCGGCTCGG ATGAGCTGCG GCGCGAATTC CTGGCGCCCG CGGTTTCCGG CGATGCGGTG
GTCTGCCTCG GCGTGTCGGA GACCGGTGCG GGCTCGGACG TCGCCTCGAT CAAGACCACG
GCCCGCTCCG ACGGCGATGA CTACGTCATC AACGGGGGCA AGATGTGGAC CACCAATGGC
ACCCAGGCCG ACTGGATGTG CCTGCTCGCC AACACCGGCG ACGGACCGGT CCATCGCAAC
AAGTCGCTGA TCATCGTTCC GATGAAGACC AAGGGCGTGC AGATCGCCCG CAAGCTCGAC
AAGCTCGGCA TGCATTCGTC CGACACCGCG CAGATCTTCT TCGACAATGT GCGCGTGCCC
AAGCGCAACC GGGTCGGCGA GGAGGGACAG GGCTTCACCT ACCAGATGCT GCAGTTCCAG
GAGGAGCGGC TGTGGGGCGC GGCGGCCTGC CTGAAGTCGC ACGAATACAT CATCGCGAAG
ACGATCGAAT ACACCCGCGA GCGCAAGGTG TTCGGCCGCA GCGTGCTCGA CAACCAGGTG
GTCCATTTCA AGCTCGCGGA GATGCAGACC GAGGTCGAGC TGTTGCGCGC GCTGATCTAT
CGGGCCGCCG AAGCGCTGAT CGCCGGCGAG GACGTCACCC GGCTCGCAAC CATGGCCAAG
CTCAAGGCCG GCCGCCTTGG TCGCGAGCTG ACCGATGCCT GCCTGCAATA TTGGGGCGGC
ATGGGCTTCA TGAACGAGAC GCCGGTCAGC CGCGCCTATC GCGACGCCCG GCTGACCTCG
ATCGGCGGCG GCGCCGACGA GGTGATGCTG ACGATCCTGT GCAAGATGAT GGGCACCTTG
CCCGGCACCG GCAAAGCGGG GAACGCCTGA
|
|---|
| Protein sequence | MLFTADHDEP RRILQKFIAA EINPHVDEWE AAGIFPAHEL FKKLGSLGFL GLNKPVEFGG
QGLDYSYALM MAEELGAITC GGVPMAIGVQ TDMATPALAR FGSDELRREF LAPAVSGDAV
VCLGVSETGA GSDVASIKTT ARSDGDDYVI NGGKMWTTNG TQADWMCLLA NTGDGPVHRN
KSLIIVPMKT KGVQIARKLD KLGMHSSDTA QIFFDNVRVP KRNRVGEEGQ GFTYQMLQFQ
EERLWGAAAC LKSHEYIIAK TIEYTRERKV FGRSVLDNQV VHFKLAEMQT EVELLRALIY
RAAEALIAGE DVTRLATMAK LKAGRLGREL TDACLQYWGG MGFMNETPVS RAYRDARLTS
IGGGADEVML TILCKMMGTL PGTGKAGNA
|
|---|
| |