| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2692 |
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| Symbol | |
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| ID | 5107843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2952124 |
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| End bp | 2953284 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503936 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001188179 |
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| Protein GI | 146307714 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0824192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.331355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCA CCCAGGAACA CGAAGAACTC CGCCGTACCG TCCGTAACTT CGTCGACAAG
GAAATCAATC CGCACGTCGA CGCCTGGGAG AAGGAAGGCC GCTTCCCCAT CCACGAGATC
TTCAAGAAGG CCGGCGAGCT GGGCCTGCTG GGCATCTCCA AACCGGAGAA GTTCGGCGGC
ATGGGCCTGG ACTACAGCTA CTCCATCGTC GCCGCCGAGG AGTTCGGCAC CATCCACTGC
GGCGGCATCC CCATGTCCAT CGGCGTGCAG ACCGACATGT GCACCCCGGC CCTGGCACGC
TTCGGCTCCG ATGAGCTGCG CGAAGAGTTC CTGCGCCCGG CCATCAGCGG CGAGATGGTC
GGCTGCATCG GCGTCTCCGA GGTCGGTGCC GGCTCCGACG TGGCAGGCCT GAAGACCACC
GCGCGCAAGG ACGGCGACGA CTACGTGATC AACGGCAGCA AGATGTGGAT CACCAACTCC
CCATCGGCCG ATTTCATCTG CCTGCTGGCC AACACCTCGG ACGACAAGCC GCACGTCAAC
AAGTCGCTGA TCATGGTGCC GATGAAGACC CCGGGCATCA GCGTCAGCCC GCACCTGGAC
AAGCTGGGCA TGCGCAGCTC GGAGACCGCC CAGGTGTTCT TCGACAACGT GCGCGTGCCG
CAGCGCTATC GCATCGGCGC TGAGGGCGCC GGCTTTATGA TGCAGATGCT GCAGTTCCAG
GAAGAGCGCC TGTTTGGCGC GGCCAACATG ATCAAGGGCC TGGAGCACTG CGTCGACGCC
ACCATCGACT ATTGCAAGCA GCGCCACACC TTTGGCCAAC CGTTGATCGA CAACCAAGTC
ATCCACTTCC GCATGGCCGA ACTGCAGACC GAGATCGAGT GCCTGCGCGC GCTGGTCTAC
CAGGCCACCG AGCAATACGT GAAGGGCCGC GACGTGACCA AGCTGGCGTC CATGGCCAAG
CTCAAGGCCG GCCGCCTGGG CCGCGAGGTG TCCGATGCCT GCCTGCAGTA CTGGGGCGGC
ATGGGCTTTA TGTGGGATAA CCCGGTGTCG CGCGCTTACC GCGACGTGCG CCTGGTCAGC
ATCGGCGGCG GCGCCGACGA AATCATGCTC GGCATCATCT GCAAGCTGAT GGGCATCCTG
CCGGGGAAGA AGAAAGGCTG A
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| Protein sequence | MIFTQEHEEL RRTVRNFVDK EINPHVDAWE KEGRFPIHEI FKKAGELGLL GISKPEKFGG
MGLDYSYSIV AAEEFGTIHC GGIPMSIGVQ TDMCTPALAR FGSDELREEF LRPAISGEMV
GCIGVSEVGA GSDVAGLKTT ARKDGDDYVI NGSKMWITNS PSADFICLLA NTSDDKPHVN
KSLIMVPMKT PGISVSPHLD KLGMRSSETA QVFFDNVRVP QRYRIGAEGA GFMMQMLQFQ
EERLFGAANM IKGLEHCVDA TIDYCKQRHT FGQPLIDNQV IHFRMAELQT EIECLRALVY
QATEQYVKGR DVTKLASMAK LKAGRLGREV SDACLQYWGG MGFMWDNPVS RAYRDVRLVS
IGGGADEIML GIICKLMGIL PGKKKG
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