| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_26700 |
|---|
| Symbol | |
|---|
| ID | 4380936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2325875 |
|---|
| End bp | 2327035 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639324707 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_790285 |
|---|
| Protein GI | 116050892 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.472617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCA CCCAGGAACA CGAGGAACTC CGCCGCACCG TTCGCAGCTT CGTCGAGCGG
GAAATCAACC CCAACGTCGA CCAGTGGGAA AAGGACGGCC GCTTCCCGAT CCACGAGATC
TTCCGCAAGG CCGGCGAACT CGGCCTGCTG GGCATCTCCA AGCCGGAGAA GTTCGGCGGC
ATGGGCCTGG ACTACAGCTA CTCGATCGTC GCCGCCGAGG AATTCGGCAG CATCACCTGC
GGCGGCATCC CGATGGCCAT CGGCGTGCAG ACCGACATGT GCACCCCGGC CCTGGCCCGC
TTCGGTTCCG ACGAGTTGCG CGAGGAGTTC CTCCGCCCGG CCATCGCCGG CGAGATGGTC
GGCTGCATCG GCGTCTCCGA GGTCGGCGCC GGCTCCGACG TCGCCGGCCT GAAGACCACC
GCGCGCAAGG ACGGCGACGA CTATGTGATC AACGGCAGCA AGATGTGGAT CACCAACTCG
CCGTCGGCCG ACTTCATGTG CCTGCTCGCC AATACCTCCG ACGACAAGCC GCACGTCAAC
AAGTCGTTGA TCGTGGTCCC GATGAAGACC CCGGGCATTA CCCTCAGTCC GCACCTGGAC
AAGCTCGGCA TGCGCAGTTC GGAGACCGCC CAGGTGTTCT TCGATAACGT CCGCGTACCG
CAGCGCAACC GCATCGGCGC GGAAGGTGCC GGCTTCATGA TGCAGATGCT GCAGTTCCAG
GAAGAACGGC TGTTCGGCGC GGCCAACATG ATCAAGGGCC TGGAGCACTG CATCGACGTC
ACCATCGAGT ATTGCAAGGA GCGCAGGACC TTCGGCCAGC CGCTGATCGA CAACCAGGTC
ATCCACTTCC GCATGGCCGA GATGATGACC GAGGTCGAGG CGCTGCGCGC CCTGGTCTAC
CAGGCCACGG AGCTGTACGT GAAAGGCAGG GACGTGACGC GCCTGGCTTC CATGGCCAAG
CTCAAGGCCG GCCGCCTCGG CCGCGAGGTC AGCGACGCCT GCCTGCAGTA CTGGGGCGGC
ATGGGCTTCA TGTGGGACAA CCCGGTCTCC CGCGCCTACC GCGACACCCG CCTGGTATCC
ATCGGCGGCG GTGCCGACGA GATCATGCTC GGCATCATCT GCAAGCTGAT GGGCATCCTG
CCGGGCAAGA AGAAAGGCTG A
|
|---|
| Protein sequence | MIFTQEHEEL RRTVRSFVER EINPNVDQWE KDGRFPIHEI FRKAGELGLL GISKPEKFGG
MGLDYSYSIV AAEEFGSITC GGIPMAIGVQ TDMCTPALAR FGSDELREEF LRPAIAGEMV
GCIGVSEVGA GSDVAGLKTT ARKDGDDYVI NGSKMWITNS PSADFMCLLA NTSDDKPHVN
KSLIVVPMKT PGITLSPHLD KLGMRSSETA QVFFDNVRVP QRNRIGAEGA GFMMQMLQFQ
EERLFGAANM IKGLEHCIDV TIEYCKERRT FGQPLIDNQV IHFRMAEMMT EVEALRALVY
QATELYVKGR DVTRLASMAK LKAGRLGREV SDACLQYWGG MGFMWDNPVS RAYRDTRLVS
IGGGADEIML GIICKLMGIL PGKKKG
|
|---|
| |