More than 300 homologs were found in PanDaTox collection
for query gene RPD_2199 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2430  acyl-CoA dehydrogenase domain protein  91.64 
 
 
384 aa  739    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.303023  n/a   
 
 
-
 
NC_007778  RPB_3266  Acyl-CoA dehydrogenase-like  92.67 
 
 
385 aa  750    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.194467  normal  0.933861 
 
 
-
 
NC_007925  RPC_3206  acyl-CoA dehydrogenase-like  88.22 
 
 
386 aa  715    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.518782 
 
 
-
 
NC_007958  RPD_2199  acyl-CoA dehydrogenase-like  100 
 
 
384 aa  795    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.539227 
 
 
-
 
NC_009485  BBta_0669  putative acyl-CoA dehydrogenase  86.13 
 
 
389 aa  700    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.282449  normal  0.0349391 
 
 
-
 
NC_009075  BURPS668_A2930  acyl-CoA dehydrogenase  72.18 
 
 
383 aa  580  1e-164  Burkholderia pseudomallei 668  Bacteria  normal  0.168413  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1150  acyl-CoA dehydrogenase  71.92 
 
 
383 aa  579  1e-164  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2775  acyl-CoA dehydrogenase  72.18 
 
 
383 aa  580  1e-164  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0288  acyl-CoA dehydrogenase  71.13 
 
 
383 aa  575  1.0000000000000001e-163  Burkholderia thailandensis E264  Bacteria  normal  0.553165  n/a   
 
 
-
 
NC_010682  Rpic_0107  acyl-CoA dehydrogenase domain protein  70.05 
 
 
385 aa  572  1.0000000000000001e-162  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0114  acyl-CoA dehydrogenase domain protein  70.05 
 
 
385 aa  572  1.0000000000000001e-162  Ralstonia pickettii 12D  Bacteria  normal  0.773913  normal  0.835014 
 
 
-
 
NC_007908  Rfer_2817  acyl-CoA dehydrogenase-like  67.89 
 
 
383 aa  561  1.0000000000000001e-159  Rhodoferax ferrireducens T118  Bacteria  normal  0.0246434  n/a   
 
 
-
 
NC_008740  Maqu_2805  acyl-CoA dehydrogenase domain-containing protein  67.19 
 
 
386 aa  558  1e-158  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2265  putative acyl-CoA dehydrogenase  67.71 
 
 
386 aa  556  1e-157  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3948  Acyl-CoA dehydrogenase-like  67.71 
 
 
385 aa  557  1e-157  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.54725  normal 
 
 
-
 
NC_008463  PA14_26700  putative acyl-CoA dehydrogenase  67.45 
 
 
386 aa  554  1e-157  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.472617  normal 
 
 
-
 
NC_009439  Pmen_2692  acyl-CoA dehydrogenase domain-containing protein  66.93 
 
 
386 aa  551  1e-156  Pseudomonas mendocina ymp  Bacteria  normal  0.0824192  normal  0.331355 
 
 
-
 
NC_013440  Hoch_4452  acyl-CoA dehydrogenase domain protein  68.24 
 
 
384 aa  549  1e-155  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0324  acyl-CoA dehydrogenase domain protein  67.99 
 
 
386 aa  540  9.999999999999999e-153  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0315  acyl-CoA dehydrogenase-like  63.28 
 
 
391 aa  525  1e-148  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4462  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  67.27 
 
 
386 aa  518  1e-146  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1722  acyl-CoA dehydrogenase-like protein  65.36 
 
 
388 aa  509  1e-143  Cupriavidus metallidurans CH34  Bacteria  normal  0.0209372  normal 
 
 
-
 
NC_008786  Veis_1896  acyl-CoA dehydrogenase domain-containing protein  64.86 
 
 
394 aa  509  1e-143  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.398062 
 
 
-
 
NC_008786  Veis_4186  acyl-CoA dehydrogenase domain-containing protein  63.82 
 
 
388 aa  503  1e-141  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.245647 
 
 
-
 
NC_008786  Veis_2414  acyl-CoA dehydrogenase domain-containing protein  64.04 
 
 
385 aa  487  1e-136  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.228381  normal 
 
 
-
 
NC_009972  Haur_4761  acyl-CoA dehydrogenase domain-containing protein  58.2 
 
 
386 aa  460  9.999999999999999e-129  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1029  acyl-CoA dehydrogenase domain protein  52.76 
 
 
381 aa  388  1e-107  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.042764  n/a   
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  42.74 
 
 
396 aa  323  3e-87  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_009675  Anae109_1179  acyl-CoA dehydrogenase domain-containing protein  43.62 
 
 
381 aa  314  9.999999999999999e-85  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.532385 
 
 
-
 
NC_011145  AnaeK_1192  acyl-CoA dehydrogenase domain protein  42.55 
 
 
385 aa  313  2.9999999999999996e-84  Anaeromyxobacter sp. K  Bacteria  normal  0.0644386  n/a   
 
 
-
 
NC_007760  Adeh_1132  Acyl-CoA dehydrogenase, type 1  42.55 
 
 
385 aa  312  7.999999999999999e-84  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1261  acyl-CoA dehydrogenase domain protein  42.29 
 
 
385 aa  311  1e-83  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.403217  n/a   
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  40.16 
 
 
386 aa  282  6.000000000000001e-75  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  37.97 
 
 
381 aa  276  3e-73  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  38.56 
 
 
378 aa  271  1e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_013441  Gbro_0451  acyl-CoA dehydrogenase domain protein  38.16 
 
 
382 aa  270  2e-71  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  37.7 
 
 
381 aa  271  2e-71  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007951  Bxe_A2768  putative acyl-CoA dehydrogenase, long- chain specific  40.16 
 
 
391 aa  267  2.9999999999999995e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.466839 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  38.03 
 
 
378 aa  267  2.9999999999999995e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_007950  Bpro_5265  acyl-CoA dehydrogenase-like  39.15 
 
 
381 aa  265  8e-70  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
382 aa  264  2e-69  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_00085  probable acyl-CoA dehydrogenase  35.54 
 
 
386 aa  263  3e-69  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  38.79 
 
 
381 aa  262  6e-69  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  38.79 
 
 
381 aa  262  8e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  36.7 
 
 
379 aa  262  8e-69  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  38.36 
 
 
380 aa  259  5.0000000000000005e-68  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_44590  putative acyl-CoA dehydrogenase  39.26 
 
 
382 aa  258  1e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.115887 
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  39.58 
 
 
381 aa  257  2e-67  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_013947  Snas_3899  acyl-CoA dehydrogenase domain-containing protein  38.89 
 
 
380 aa  256  5e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.601021  normal 
 
 
-
 
NC_008048  Sala_3159  acyl-CoA dehydrogenase-like protein  36.34 
 
 
384 aa  256  6e-67  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  37.2 
 
 
380 aa  255  7e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0132  long-chain acyl-CoA dehydrogenase  35.81 
 
 
384 aa  254  1.0000000000000001e-66  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0602  putative acyl-CoA dehydrogenase  37.23 
 
 
374 aa  255  1.0000000000000001e-66  Burkholderia xenovorans LB400  Bacteria  normal  0.0892135  normal  0.143827 
 
 
-
 
NC_009656  PSPA7_3798  putative acyl-CoA dehydrogenase  38.73 
 
 
382 aa  254  2.0000000000000002e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2461  acyl-CoA dehydrogenase domain-containing protein  38.46 
 
 
381 aa  252  6e-66  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.160964  normal 
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  36.94 
 
 
381 aa  251  1e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3740  acyl-CoA dehydrogenase-like protein  37.37 
 
 
382 aa  251  1e-65  Mycobacterium sp. MCS  Bacteria  normal  0.421985  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  36.51 
 
 
382 aa  251  1e-65  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3813  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
382 aa  251  1e-65  Mycobacterium sp. KMS  Bacteria  normal  normal  0.285243 
 
 
-
 
NC_008740  Maqu_3438  acyl-CoA dehydrogenase domain-containing protein  36.6 
 
 
379 aa  251  2e-65  Marinobacter aquaeolei VT8  Bacteria  normal  0.0342749  n/a   
 
 
-
 
NC_009077  Mjls_3752  acyl-CoA dehydrogenase domain-containing protein  37.37 
 
 
382 aa  251  2e-65  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2724  putative acyl-CoA dehydrogenase  38.73 
 
 
379 aa  251  2e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2850  acyl-CoA dehydrogenase domain-containing protein  38.16 
 
 
381 aa  250  2e-65  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0120  acyl-CoA dehydrogenase domain protein  36.05 
 
 
384 aa  250  3e-65  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  35.71 
 
 
380 aa  249  6e-65  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  35.71 
 
 
380 aa  249  6e-65  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1892  acyl-CoA dehydrogenase domain-containing protein  35.11 
 
 
378 aa  249  8e-65  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  37.57 
 
 
392 aa  248  1e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4090  acyl-CoA dehydrogenase domain-containing protein  34.56 
 
 
380 aa  248  1e-64  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0103  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
384 aa  248  1e-64  Acidovorax sp. JS42  Bacteria  normal  normal  0.250582 
 
 
-
 
NC_007492  Pfl01_1809  Acyl-CoA dehydrogenase-like  38.2 
 
 
382 aa  247  2e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2198  acyl-CoA dehydrogenase-like  36.41 
 
 
379 aa  247  3e-64  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.583783 
 
 
-
 
NC_009921  Franean1_4286  acyl-CoA dehydrogenase domain-containing protein  36.87 
 
 
379 aa  246  4e-64  Frankia sp. EAN1pec  Bacteria  normal  normal  0.330894 
 
 
-
 
NC_010002  Daci_0697  acyl-CoA dehydrogenase domain-containing protein  36.17 
 
 
380 aa  246  4.9999999999999997e-64  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4587  acyl-CoA dehydrogenase domain-containing protein  34.66 
 
 
380 aa  246  6e-64  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2118  acyl-CoA dehydrogenase domain-containing protein  35.19 
 
 
382 aa  246  6.999999999999999e-64  Marinobacter aquaeolei VT8  Bacteria  normal  0.0463825  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  34.48 
 
 
383 aa  245  9e-64  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  36 
 
 
384 aa  244  1.9999999999999999e-63  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4766  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
394 aa  244  1.9999999999999999e-63  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000278675 
 
 
-
 
NC_008726  Mvan_0906  acyl-CoA dehydrogenase domain-containing protein  36.68 
 
 
380 aa  243  3e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  34.31 
 
 
378 aa  243  3.9999999999999997e-63  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  34.31 
 
 
378 aa  243  3.9999999999999997e-63  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  34.31 
 
 
378 aa  243  3.9999999999999997e-63  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_007778  RPB_3267  Acyl-CoA dehydrogenase-like  35.71 
 
 
379 aa  243  5e-63  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.691288  normal  0.607013 
 
 
-
 
NC_009338  Mflv_2118  acyl-CoA dehydrogenase domain-containing protein  33.86 
 
 
380 aa  243  5e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.438957 
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  34.31 
 
 
378 aa  242  7e-63  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  34.31 
 
 
378 aa  242  7e-63  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2752  acyl-CoA dehydrogenase-like  35.6 
 
 
387 aa  242  7.999999999999999e-63  Rhodoferax ferrireducens T118  Bacteria  normal  0.171242  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  34.31 
 
 
430 aa  242  9e-63  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4166  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  37.4 
 
 
379 aa  241  1e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.503131  n/a   
 
 
-
 
NC_009511  Swit_1764  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
380 aa  241  1e-62  Sphingomonas wittichii RW1  Bacteria  normal  0.937718  normal 
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  34.22 
 
 
383 aa  241  2e-62  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009077  Mjls_4308  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
380 aa  239  4e-62  Mycobacterium sp. JLS  Bacteria  normal  0.828452  normal 
 
 
-
 
NC_008146  Mmcs_4078  acyl-CoA dehydrogenase-like protein  33.33 
 
 
380 aa  239  4e-62  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
388 aa  240  4e-62  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_008705  Mkms_4154  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
380 aa  239  4e-62  Mycobacterium sp. KMS  Bacteria  normal  normal  0.815208 
 
 
-
 
NC_008726  Mvan_4205  acyl-CoA dehydrogenase domain-containing protein  37.11 
 
 
382 aa  239  5e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2429  acyl-CoA dehydrogenase domain protein  36.24 
 
 
382 aa  239  5.999999999999999e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.62219  n/a   
 
 
-
 
NC_007333  Tfu_1512  putative acyl-CoA dehydrogenase  37.83 
 
 
382 aa  239  8e-62  Thermobifida fusca YX  Bacteria  normal  0.116644  n/a   
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  33.51 
 
 
378 aa  239  8e-62  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
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