40 homologs were found in PanDaTox collection
for query gene Pden_2064 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008686  Pden_2064  P27 family phage terminase small subunit  100 
 
 		 156 aa  321  2e-87  Paracoccus denitrificans PD1222  Bacteria  normal  1  hitchhiker  0.00145671 
 
 
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NC_008751  Dvul_0871  P27 family phage terminase small subunit  45.14 
 
 		 152 aa  129  2.0000000000000002e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal  1 
 
 
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NC_010625  Bphy_7138  P27 family phage terminase small subunit  44.08 
 
 		 152 aa  109  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00058611 
 
 
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NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  37.18 
 
 		 161 aa  107  4.0000000000000004e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal  1 
 
 
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NC_009012  Cthe_1723  P27 family phage terminase small subunit  37.25 
 
 		 160 aa  105  2e-22  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
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NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  32.47 
 
 		 154 aa  82.8  0.000000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00000187625 
 
 
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NC_002947  PP_3882  phage terminase, small subunit, putative  29.94 
 
 		 155 aa  80.1  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
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NC_010623  Bphy_3398  P27 family phage terminase small subunit  33.59 
 
 		 158 aa  78.6  0.00000000000003  Burkholderia phymatum STM815  Bacteria  normal  0.096573  hitchhiker  0.0000000756325 
 
 
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NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  29.8 
 
 		 161 aa  75.9  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
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NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  30.06 
 
 		 163 aa  73.9  0.0000000000007  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  30.72 
 
 		 170 aa  73.6  0.000000000001  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
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NC_011725  BCB4264_A2620  phage terminase, small subunit, putative, P27 family  30.82 
 
 		 167 aa  63.2  0.000000001  Bacillus cereus B4264  Bacteria  normal  0.0118703  n/a   
 
 
-
 
NC_011205  SeD_A2272  putative phage terminase, small subunit, P27 family  29.11 
 
 		 164 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0621935  hitchhiker  0.0000000000000114171 
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  30.92 
 
 		 170 aa  62.4  0.000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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NC_014149  Plim_4249  phage terminase, small subunit, , P27 family  31.88 
 
 		 160 aa  62.4  0.000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_011894  Mnod_7333  phage terminase, small subunit, , P27 family  28.76 
 
 		 152 aa  62.4  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.367321  n/a   
 
 
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NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  28.19 
 
 		 132 aa  62  0.000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal  1 
 
 
-
 
NC_011094  SeSA_A2268  putative phage terminase, small subunit, P27 family  30.07 
 
 		 164 aa  60.8  0.000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.753219  normal  0.08804 
 
 
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NC_009513  Lreu_0669  P27 family phage terminase small subunit  28.69 
 
 		 154 aa  60.5  0.000000008  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
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NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  29.46 
 
 		 144 aa  59.7  0.00000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
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NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  27.7 
 
 		 165 aa  58.5  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
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NC_011830  Dhaf_1454  phage terminase, small subunit, , P27 family  27.03 
 
 		 165 aa  57  0.00000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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NC_010831  Cphamn1_0220  phage terminase, small subunit, , P27 family  31.06 
 
 		 166 aa  56.2  0.0000002  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000228338  unclonable  0.00000741257 
 
 
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NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  27.27 
 
 		 137 aa  52.4  0.000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  26.27 
 
 		 130 aa  52.4  0.000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  31.03 
 
 		 144 aa  52  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_3265  phage terminase, small subunit, P27 family  29.46 
 
 		 153 aa  51.2  0.000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_007204  Psyc_0465  phage terminase, small subunit  25 
 
 		 157 aa  51.2  0.000005  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.371651 
 
 
-
 
NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  26.45 
 
 		 137 aa  50.8  0.000006  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_011769  DvMF_1659  putative phage terminase, small subunit, P27 family  27.94 
 
 		 157 aa  47.8  0.00006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_011989  Avi_0871  Phage terminase protein  22.69 
 
 		 145 aa  47.4  0.00007  Agrobacterium vitis S4  Bacteria  normal  0.0530685  n/a   
 
 
-
 
NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  25.83 
 
 		 143 aa  47  0.00009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.369715 
 
 
-
 
NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  25.62 
 
 		 138 aa  45.4  0.0003  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
-
 
NC_011658  BCAH187_A4006  phage terminase, small subunit, putative, P27 family  27.19 
 
 		 173 aa  45.4  0.0003  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_1651  P27 family phage terminase small subunit  29.35 
 
 		 124 aa  45.1  0.0004  Enterobacter sp. 638  Bacteria  normal  0.430539  normal  1 
 
 
-
 
NC_010498  EcSMS35_1185  P27 family phage terminase small subunit  25 
 
 		 160 aa  44.3  0.0006  Escherichia coli SMS-3-5  Bacteria  normal  0.133965  hitchhiker  0.000000000518622 
 
 
-
 
NC_008265  CPR_C0016  phage terminase, small subunit, P27 family  23.86 
 
 		 173 aa  43.5  0.001  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_1314  Phage terminase small subunit-like protein  23.73 
 
 		 132 aa  43.1  0.001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_1698  Phage terminase small subunit-like protein  23.73 
 
 		 132 aa  43.1  0.001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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NC_014150  Bmur_2274  Phage terminase small subunit-like protein  23.73 
 
 		 132 aa  43.1  0.001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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