Gene SO_2968 details

Gene Information

• Locus tag: SO_2968
• ID: 1170656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3101977
• End bp: 3102489
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637344779
• Product: phage terminase small subunit
• Protein accession: NP_718537
• Protein GI: 24374494
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3747] Phage terminase, small subunit
• TIGRFAM ID: [TIGR01558] phage terminase, small subunit, putative, P27 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAGTAG GACGAAAAAC CACGCCGACC GCGCTCAAGC TCGTTACAGG AAACCCCGGC 
AAAAGGCCGC TCAATAAAAA AGAGCCAAAG CTAGAAGCGG GGATCCCGCG AATGCCGGCA 
TATCTGAGCC CAAGAGCCAA AGCCGCATGG AAAAAGCTAA CAAAACTGCT TAAAGACATG 
GGCGTACTCA CACTGGCCGA CGGCATGGCC CTTGAGCGTT TATGTGATGT TTATTCCGAA 
ATCCTCGATC TGAGGGACGA AATAAAACAA AACGGCCGAA CTTACCAAAG CATCAAAATC 
ATCGGCGAAA ACATCGACGA AGAAACCAAA GAATTTACCC AAGTCGAGCA AATGCTAATG 
AAGGCAAACC CAGCCGTGCA AATGCTGGCC GATGCCGACA GGCGATTTAA AGCCTATCTC 
GTAGAATTTG GGCTAACTCC ATCGGCCCGT AGCAAAGTAC AGGTAACTGA TGGCGACAAG 
AAAAAAGACG ACATCGACGA GTTCTTCGGC TGA 

 

Protein sequence

MAVGRKTTPT ALKLVTGNPG KRPLNKKEPK LEAGIPRMPA YLSPRAKAAW KKLTKLLKDM 
GVLTLADGMA LERLCDVYSE ILDLRDEIKQ NGRTYQSIKI IGENIDEETK EFTQVEQMLM 
KANPAVQMLA DADRRFKAYL VEFGLTPSAR SKVQVTDGDK KKDDIDEFFG