Gene SeD_A2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2272 
Symbol 
ID6872322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2167357 
End bp2167851 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID642785370 
Productputative phage terminase, small subunit, P27 family 
Protein accessionYP_002216032 
Protein GI198242434 
COG category[L] Replication, recombination and repair 
COG ID[COG3747] Phage terminase, small subunit 
TIGRFAM ID[TIGR01558] phage terminase, small subunit, putative, P27 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0621935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000000000000114171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGGAA CGGCGGGGCG TTCCGGGCGT CGCCCCAAGC CTACGGCGCG CAAGGAGCTG 
GCCGGGAACC CCGGAAAGCG AGCCCTGAAT AAAGAAGAAC CAGTATTCAC ACCAATAAAT
GGGGTTTCTC CTCCGGACTG GTTTAACGAA GAAGATATGC CTCTGGCATC AGTTATGTGG
GAACTGACCA CCAAAGAATT GTGTGGTCAG GGACTGCTGT GTGTTACGGA TTTGGCTGTA
CTGGAGCGCT GGTGTGTCGC CTACGAGTTC TGGCGGAGAG CAGTAAAAAA TATCGCAAAA
GAAGGTAACA CCATAACTGG CGCTATGGGG GGGAAAATAA AGAACCCTGA ACTTACTGCC
AAGAAAGAAC AGGAATCGGA GATGAGTTCT ACTGGTTCTA TGCTGGGCCT TGACCCCAGT
AGTCGACAGC GCCTTATTGG TCTGGCCGGA CAGAAGAAAA CATCTAACCC ATTCCTGAAG
ATGATCAACT CATGA
 
Protein sequence
MAGTAGRSGR RPKPTARKEL AGNPGKRALN KEEPVFTPIN GVSPPDWFNE EDMPLASVMW 
ELTTKELCGQ GLLCVTDLAV LERWCVAYEF WRRAVKNIAK EGNTITGAMG GKIKNPELTA
KKEQESEMSS TGSMLGLDPS SRQRLIGLAG QKKTSNPFLK MINS