39 homologs were found in PanDaTox collection
for query gene Amir_3265 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_3265  phage terminase, small subunit, P27 family  100 
 
 		 153 aa  309  9e-84  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
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NC_009012  Cthe_1723  P27 family phage terminase small subunit  31.72 
 
 		 160 aa  87.4  7e-17  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
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NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  35.33 
 
 		 161 aa  77.8  0.00000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal  1 
 
 
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NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  33.33 
 
 		 163 aa  71.2  0.000000000004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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NC_008751  Dvul_0871  P27 family phage terminase small subunit  36.22 
 
 		 152 aa  70.1  0.00000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal  1 
 
 
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NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  34.75 
 
 		 154 aa  69.3  0.00000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00000187625 
 
 
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NC_010625  Bphy_7138  P27 family phage terminase small subunit  32.33 
 
 		 152 aa  67  0.00000000009  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00058611 
 
 
-
 
NC_007204  Psyc_0465  phage terminase, small subunit  35 
 
 		 157 aa  64.3  0.0000000006  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  0.371651 
 
 
-
 
NC_002947  PP_3882  phage terminase, small subunit, putative  31.47 
 
 		 155 aa  63.2  0.000000001  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
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NC_014149  Plim_4249  phage terminase, small subunit, , P27 family  32.12 
 
 		 160 aa  63.2  0.000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  31.34 
 
 		 161 aa  62  0.000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  30.92 
 
 		 170 aa  58.2  0.00000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  30.82 
 
 		 170 aa  58.2  0.00000005  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
-
 
NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  25.52 
 
 		 165 aa  57.4  0.00000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010623  Bphy_3398  P27 family phage terminase small subunit  28.68 
 
 		 158 aa  55.5  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  0.096573  hitchhiker  0.0000000756325 
 
 
-
 
NC_011205  SeD_A2272  putative phage terminase, small subunit, P27 family  28.57 
 
 		 164 aa  53.1  0.000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0621935  hitchhiker  0.0000000000000114171 
 
 
-
 
NC_011830  Dhaf_1454  phage terminase, small subunit, , P27 family  26.13 
 
 		 165 aa  53.5  0.000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  38 
 
 		 137 aa  52.4  0.000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_0871  Phage terminase protein  28.47 
 
 		 145 aa  52.4  0.000002  Agrobacterium vitis S4  Bacteria  normal  0.0530685  n/a   
 
 
-
 
NC_007493  RSP_1651  hypothetical protein  32.39 
 
 		 145 aa  52.4  0.000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
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NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  32.38 
 
 		 130 aa  51.6  0.000004  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_0220  phage terminase, small subunit, , P27 family  26.77 
 
 		 166 aa  51.2  0.000004  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000228338  unclonable  0.00000741257 
 
 
-
 
NC_011094  SeSA_A2268  putative phage terminase, small subunit, P27 family  28.57 
 
 		 164 aa  51.6  0.000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.753219  normal  0.08804 
 
 
-
 
NC_008686  Pden_2064  P27 family phage terminase small subunit  29.46 
 
 		 156 aa  51.2  0.000005  Paracoccus denitrificans PD1222  Bacteria  normal  1  hitchhiker  0.00145671 
 
 
-
 
NC_011725  BCB4264_A2620  phage terminase, small subunit, putative, P27 family  25.15 
 
 		 167 aa  50.4  0.000009  Bacillus cereus B4264  Bacteria  normal  0.0118703  n/a   
 
 
-
 
NC_008261  CPF_1588  putative phage terminase, small subunit  26.85 
 
 		 170 aa  50.4  0.00001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0296354  n/a   
 
 
-
 
NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  36 
 
 		 137 aa  50.1  0.00001  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  29.41 
 
 		 144 aa  49.7  0.00002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  32.74 
 
 		 143 aa  48.9  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.369715 
 
 
-
 
NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  30.19 
 
 		 138 aa  47.4  0.00007  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
-
 
NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  31.25 
 
 		 132 aa  47  0.00009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal  1 
 
 
-
 
NC_009565  TBFG_12668  phiRv2 prophage protein  27.94 
 
 		 163 aa  47  0.0001  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000845682  normal  1 
 
 
-
 
NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  31.25 
 
 		 131 aa  45.1  0.0004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
-
 
NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  30.83 
 
 		 144 aa  43.9  0.0007  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008542  Bcen2424_1320  P27 family phage terminase small subunit  31.71 
 
 		 154 aa  43.1  0.001  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000502965  n/a   
 
 
-
 
NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  30.53 
 
 		 131 aa  43.5  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
-
 
NC_009636  Smed_1338  P27 family phage terminase small subunit  23.7 
 
 		 156 aa  43.5  0.001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_0839  phage terminase, small subunit, putative, P27  31.71 
 
 		 154 aa  43.1  0.001  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.00189834  n/a   
 
 
-
 
NC_010721  Mpop_5450  hypothetical protein  27.19 
 
 		 130 aa  42  0.003  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
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