| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1338 |
|---|
| Symbol | |
|---|
| ID | 5322186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 1425279 |
|---|
| End bp | 1425749 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640790280 |
|---|
| Product | P27 family phage terminase small subunit |
|---|
| Protein accession | YP_001327023 |
|---|
| Protein GI | 150396556 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3747] Phage terminase, small subunit |
|---|
| TIGRFAM ID | [TIGR01558] phage terminase, small subunit, putative, P27 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCGA GAGGACCGCG GCCTGAAACT CCTGAAATTC AGGCCCTGAA AGGCAATCCC
GGCAAGCGCA AGAAGCGTGC GCCGTCGATA AAGCCGGCAG GCGAGACTGT CATCCCGAAC
TATCTGCAGG GTGACGCGCT GGCCTGCTTC AAGATGATTA CGGCAGCCAT GCCGCCTGGA
TATTTCGCCT CAACCGACAC GGGCTCGATT GCCGTTTACG CAGCGGCATG GGCAGACCAT
AAGGCGGCCG TTAGTGCGCT GGCCGTGGAG CCGGCGATTG TTGACGGCTC CACCGGCAAT
AAGCAGCCGA ATCCGTGGTT CAAAATCAAG AACGAAGCGG CCCGCATCAT GATGGCCATG
GGCGATCGCT TGGGGCTCGA CCCCAAGTCT AGAGCGGCGC TTTCGCCTCC AGAGGAGAAG
AAGTCATCGA AGTTCAGCGG CCTGATTGGG CGAAGCGCGG AGACGGCGTA A
|
|---|
| Protein sequence | MGARGPRPET PEIQALKGNP GKRKKRAPSI KPAGETVIPN YLQGDALACF KMITAAMPPG
YFASTDTGSI AVYAAAWADH KAAVSALAVE PAIVDGSTGN KQPNPWFKIK NEAARIMMAM
GDRLGLDPKS RAALSPPEEK KSSKFSGLIG RSAETA
|
|---|
| |