37 homologs were found in PanDaTox collection
for query gene Bcenmc03_1288 on replicon NC_010508
Organism: Burkholderia cenocepacia MC0-3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  100 
 
 
132 aa  270  5.000000000000001e-72  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal 
 
 
-
 
NC_009012  Cthe_1723  P27 family phage terminase small subunit  40.82 
 
 
160 aa  100  9e-21  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
-
 
NC_002947  PP_3882  phage terminase, small subunit, putative  32.24 
 
 
155 aa  87.4  6e-17  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
-
 
NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  31.45 
 
 
163 aa  77.8  0.00000000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7138  P27 family phage terminase small subunit  32.65 
 
 
152 aa  77.4  0.00000000000006  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00058611 
 
 
-
 
NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  29.07 
 
 
170 aa  76.3  0.0000000000001  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  30.57 
 
 
170 aa  72.8  0.000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  35.66 
 
 
161 aa  70.9  0.000000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
-
 
NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  27.39 
 
 
161 aa  70.1  0.000000000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal 
 
 
-
 
NC_007204  Psyc_0465  phage terminase, small subunit  31.76 
 
 
157 aa  67.8  0.00000000005  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.371651 
 
 
-
 
NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  29.61 
 
 
154 aa  67  0.00000000008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00000187625 
 
 
-
 
NC_011205  SeD_A2272  putative phage terminase, small subunit, P27 family  34.29 
 
 
164 aa  66.2  0.0000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0621935  hitchhiker  0.0000000000000114171 
 
 
-
 
NC_010623  Bphy_3398  P27 family phage terminase small subunit  46.48 
 
 
158 aa  66.6  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  0.096573  hitchhiker  0.0000000756325 
 
 
-
 
NC_011094  SeSA_A2268  putative phage terminase, small subunit, P27 family  35.71 
 
 
164 aa  65.9  0.0000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.753219  normal  0.08804 
 
 
-
 
NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  28.57 
 
 
165 aa  64.3  0.0000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0871  P27 family phage terminase small subunit  30.6 
 
 
152 aa  63.2  0.000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal 
 
 
-
 
NC_008686  Pden_2064  P27 family phage terminase small subunit  28.19 
 
 
156 aa  62  0.000000002  Paracoccus denitrificans PD1222  Bacteria  normal  hitchhiker  0.00145671 
 
 
-
 
NC_009565  TBFG_12668  phiRv2 prophage protein  28.67 
 
 
163 aa  57.4  0.00000006  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000845682  normal 
 
 
-
 
NC_010498  EcSMS35_1185  P27 family phage terminase small subunit  24.16 
 
 
160 aa  56.2  0.0000001  Escherichia coli SMS-3-5  Bacteria  normal  0.133965  hitchhiker  0.000000000518622 
 
 
-
 
NC_009513  Lreu_0669  P27 family phage terminase small subunit  24.11 
 
 
154 aa  53.1  0.000001  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2620  phage terminase, small subunit, putative, P27 family  27.7 
 
 
167 aa  53.5  0.000001  Bacillus cereus B4264  Bacteria  normal  0.0118703  n/a   
 
 
-
 
NC_011004  Rpal_3988  phage terminase, small subunit, , P27 family  32.2 
 
 
125 aa  51.6  0.000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  26.5 
 
 
144 aa  52  0.000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  29.1 
 
 
144 aa  51.2  0.000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1454  phage terminase, small subunit, , P27 family  25.17 
 
 
165 aa  50.8  0.000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  32.99 
 
 
131 aa  49.7  0.00001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
-
 
NC_007493  RSP_2353  hypothetical protein  29.06 
 
 
131 aa  49.3  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  31.96 
 
 
131 aa  49.3  0.00002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
-
 
NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  27.56 
 
 
143 aa  48.5  0.00003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.369715 
 
 
-
 
NC_010721  Mpop_5450  hypothetical protein  27.78 
 
 
130 aa  48.1  0.00004  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_010002  Daci_1630  hypothetical protein  28.46 
 
 
145 aa  47.4  0.00006  Delftia acidovorans SPH-1  Bacteria  normal  0.299301  normal 
 
 
-
 
NC_013093  Amir_3265  phage terminase, small subunit, P27 family  31.25 
 
 
153 aa  47  0.00008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  32.08 
 
 
137 aa  46.6  0.0001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0960  hypothetical protein  30.23 
 
 
138 aa  46.6  0.0001  Polaromonas sp. JS666  Bacteria  normal  normal  0.0602496 
 
 
-
 
NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  32.08 
 
 
137 aa  44.7  0.0004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2971  hypothetical protein  29.51 
 
 
134 aa  44.3  0.0006  Polaromonas sp. JS666  Bacteria  normal  0.180446  normal 
 
 
-
 
NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  28.57 
 
 
130 aa  42.4  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>