Gene Pden_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2064 
Symbol 
ID4578928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2070153 
End bp2070623 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID639769394 
ProductP27 family phage terminase small subunit 
Protein accessionYP_915852 
Protein GI119384796 
COG category[L] Replication, recombination and repair 
COG ID[COG3747] Phage terminase, small subunit 
TIGRFAM ID[TIGR01558] phage terminase, small subunit, putative, P27 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00145671 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGGTC GCAAGCCACT GCCGACGCAG CTCAAACTGG TCAAGGGCAC GGCCCGGTCG 
CACCGGCTGA ACCCGGATGA GCCGCAGCCG GTGGTCGCGA CCCCGGACCC GCCCGAGCAT
CTCGACGAAG CGGCTGCCGC GAAGTTCACC GAGATGGCCG CGCTGCTGGC GCGGCATGGG
GTGATGACCG AACTCGATGT CGGCGCGCTG GCCCGTTACG TGGTGATCTG GCGCCGCTGG
CTCGAGGCGG AGGCCGAGGT CAAGCGCCGC GGCCCGGTGG TCAAGACCGT GGGCGGGAAT
ATCATCCAGA ACCCGTTCCT GGCGGTGGCC AATAAATGCC TCGCGCAGAT GGGCCAGATC
GAGAGTGAGT TCGGGATGAC GCCATCCAGC CGCACCCGGG TGCGCATGGC AGAGCCGTCC
AAGACCCGCG ACCCGTTCGA GGATTATCTG AACCGTGGCA GCAGCGCGTA A
 
Protein sequence
MPGRKPLPTQ LKLVKGTARS HRLNPDEPQP VVATPDPPEH LDEAAAAKFT EMAALLARHG 
VMTELDVGAL ARYVVIWRRW LEAEAEVKRR GPVVKTVGGN IIQNPFLAVA NKCLAQMGQI
ESEFGMTPSS RTRVRMAEPS KTRDPFEDYL NRGSSA