30 homologs were found in PanDaTox collection
for query gene Lreu_0669 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_0669  P27 family phage terminase small subunit  100 
 
 
154 aa  316  7e-86  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0871  P27 family phage terminase small subunit  29.06 
 
 
152 aa  68.2  0.00000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal 
 
 
-
 
NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  32.17 
 
 
165 aa  67.4  0.00000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A2620  phage terminase, small subunit, putative, P27 family  32.06 
 
 
167 aa  67.4  0.00000000007  Bacillus cereus B4264  Bacteria  normal  0.0118703  n/a   
 
 
-
 
NC_009012  Cthe_1723  P27 family phage terminase small subunit  30.63 
 
 
160 aa  60.8  0.000000006  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
-
 
NC_008686  Pden_2064  P27 family phage terminase small subunit  28.69 
 
 
156 aa  60.5  0.000000008  Paracoccus denitrificans PD1222  Bacteria  normal  hitchhiker  0.00145671 
 
 
-
 
NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  27.37 
 
 
130 aa  58.5  0.00000004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1454  phage terminase, small subunit, , P27 family  30.07 
 
 
165 aa  58.5  0.00000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  27.35 
 
 
161 aa  55.5  0.0000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
-
 
NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  26.45 
 
 
137 aa  54.3  0.0000005  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  24.11 
 
 
132 aa  53.1  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal 
 
 
-
 
NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  26.73 
 
 
137 aa  52.4  0.000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7138  P27 family phage terminase small subunit  25.86 
 
 
152 aa  52.8  0.000002  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00058611 
 
 
-
 
NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  23.97 
 
 
161 aa  52  0.000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal 
 
 
-
 
NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  27.93 
 
 
144 aa  50.4  0.000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  24.37 
 
 
144 aa  50.4  0.000009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  26.13 
 
 
143 aa  49.7  0.00001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.369715 
 
 
-
 
NC_010831  Cphamn1_0220  phage terminase, small subunit, , P27 family  33.33 
 
 
166 aa  49.7  0.00001  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000228338  unclonable  0.00000741257 
 
 
-
 
NC_009513  Lreu_1120  P27 family phage terminase small subunit  24.46 
 
 
157 aa  48.1  0.00004  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  25.74 
 
 
138 aa  47.8  0.00006  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
-
 
NC_008531  LEUM_1650  Phage terminase, small subunit  24 
 
 
187 aa  47  0.00009  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  27.08 
 
 
131 aa  45.4  0.0003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
-
 
NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  26.04 
 
 
131 aa  44.7  0.0004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
-
 
NC_007493  RSP_2353  hypothetical protein  26.83 
 
 
131 aa  44.3  0.0006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  26.36 
 
 
163 aa  44.3  0.0006  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0871  Phage terminase protein  23.39 
 
 
145 aa  42.7  0.002  Agrobacterium vitis S4  Bacteria  normal  0.0530685  n/a   
 
 
-
 
NC_014149  Plim_4249  phage terminase, small subunit, , P27 family  22.39 
 
 
160 aa  42  0.003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1651  hypothetical protein  25.81 
 
 
145 aa  41.6  0.004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0465  phage terminase, small subunit  24.58 
 
 
157 aa  41.6  0.004  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.371651 
 
 
-
 
NC_011772  BCG9842_B3316  putative terminase small subunit  26.53 
 
 
180 aa  40.4  0.01  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000000000140314 
 
 
-
 
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