25 homologs were found in PanDaTox collection
for query gene Lreu_1120 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_1120  P27 family phage terminase small subunit  100 
 
 
157 aa  328  2e-89  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1650  Phage terminase, small subunit  32.79 
 
 
187 aa  70.5  0.000000000009  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  30.7 
 
 
161 aa  58.9  0.00000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
-
 
NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  27.34 
 
 
170 aa  58.2  0.00000005  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  27.97 
 
 
170 aa  55.8  0.0000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  30.63 
 
 
143 aa  56.2  0.0000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.369715 
 
 
-
 
NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  28.83 
 
 
144 aa  54.7  0.0000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_0220  phage terminase, small subunit, , P27 family  29.13 
 
 
166 aa  51.6  0.000004  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000228338  unclonable  0.00000741257 
 
 
-
 
NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  28.83 
 
 
137 aa  49.3  0.00002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  27.93 
 
 
138 aa  49.3  0.00002  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
-
 
NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  23.53 
 
 
163 aa  48.5  0.00003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1615  P27 family phage terminase small subunit  25.71 
 
 
178 aa  48.1  0.00004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.415923  normal  0.344261 
 
 
-
 
NC_009513  Lreu_0669  P27 family phage terminase small subunit  24.46 
 
 
154 aa  48.1  0.00004  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  27.93 
 
 
137 aa  48.5  0.00004  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2272  putative phage terminase, small subunit, P27 family  28.57 
 
 
164 aa  48.5  0.00004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0621935  hitchhiker  0.0000000000000114171 
 
 
-
 
NC_009436  Ent638_1651  P27 family phage terminase small subunit  25 
 
 
124 aa  45.4  0.0003  Enterobacter sp. 638  Bacteria  normal  0.430539  normal 
 
 
-
 
NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  23.53 
 
 
154 aa  45.4  0.0003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00000187625 
 
 
-
 
NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  28.18 
 
 
131 aa  43.9  0.0008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
-
 
NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  27.27 
 
 
131 aa  43.9  0.001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
-
 
NC_008751  Dvul_0871  P27 family phage terminase small subunit  24.11 
 
 
152 aa  42.7  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal 
 
 
-
 
NC_010498  EcSMS35_1185  P27 family phage terminase small subunit  26.79 
 
 
160 aa  42.4  0.002  Escherichia coli SMS-3-5  Bacteria  normal  0.133965  hitchhiker  0.000000000518622 
 
 
-
 
NC_011094  SeSA_A2268  putative phage terminase, small subunit, P27 family  24.8 
 
 
164 aa  41.6  0.004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.753219  normal  0.08804 
 
 
-
 
NC_010625  Bphy_7138  P27 family phage terminase small subunit  22.13 
 
 
152 aa  41.2  0.005  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00058611 
 
 
-
 
NC_002947  PP_3882  phage terminase, small subunit, putative  24.09 
 
 
155 aa  41.2  0.005  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
-
 
NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  22.76 
 
 
161 aa  40.8  0.007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal 
 
 
-
 
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