32 homologs were found in PanDaTox collection
for query gene RSP_2353 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007493  RSP_2353  hypothetical protein  100 
 
 		 131 aa  261  2e-69  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_3988  phage terminase, small subunit, , P27 family  48.06 
 
 		 125 aa  99.4  2e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_1473  phage terminase, small subunit, putative, P27  47.86 
 
 		 131 aa  94.4  5e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.889427  normal  0.331074 
 
 
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NC_007406  Nwi_1617  phage terminase, small subunit, putative, P27  49.14 
 
 		 131 aa  94.4  5e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.207143  normal  0.415042 
 
 
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NC_009049  Rsph17029_0286  P27 family phage terminase small subunit  41.18 
 
 		 144 aa  88.2  4e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
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NC_007964  Nham_0334  phage terminase, small subunit, putative, P27  38.06 
 
 		 137 aa  83.6  0.000000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_009428  Rsph17025_1369  P27 family phage terminase small subunit  40 
 
 		 143 aa  83.2  0.000000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.369715 
 
 
-
 
NC_007964  Nham_2021  phage terminase, small subunit, putative, P27  37.31 
 
 		 137 aa  81.6  0.000000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1724  phage terminase, small subunit, putative, P27  34.33 
 
 		 138 aa  77  0.00000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  0.0277511  n/a   
 
 
-
 
NC_010721  Mpop_5450  hypothetical protein  37.12 
 
 		 130 aa  60.1  0.00000001  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0871  P27 family phage terminase small subunit  32.46 
 
 		 152 aa  57.8  0.00000005  Desulfovibrio vulgaris DP4  Bacteria  normal  0.831198  normal  1 
 
 
-
 
NC_011989  Avi_0871  Phage terminase protein  32.31 
 
 		 145 aa  55.8  0.0000002  Agrobacterium vitis S4  Bacteria  normal  0.0530685  n/a   
 
 
-
 
NC_007964  Nham_2481  phage terminase, small subunit, putative, P27  34.38 
 
 		 130 aa  55.5  0.0000003  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_2597  phage terminase, small subunit, , P27 family  30.52 
 
 		 170 aa  48.9  0.00002  Shewanella baltica OS223  Bacteria  normal  0.115209  normal  0.0515475 
 
 
-
 
NC_010508  Bcenmc03_1288  P27 family phage terminase small subunit  29.06 
 
 		 132 aa  49.3  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.163062  normal  1 
 
 
-
 
NC_009012  Cthe_1723  P27 family phage terminase small subunit  28.35 
 
 		 160 aa  48.5  0.00003  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.000117045  n/a   
 
 
-
 
NC_010831  Cphamn1_0220  phage terminase, small subunit, , P27 family  29.7 
 
 		 166 aa  48.5  0.00003  Chlorobium phaeobacteroides BS1  Bacteria  unclonable  0.0000000228338  unclonable  0.00000741257 
 
 
-
 
NC_009049  Rsph17029_0646  P27 family phage terminase small subunit  29.79 
 
 		 161 aa  47.8  0.00005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.646797  normal  1 
 
 
-
 
NC_007434  BURPS1710b_1678  P27 family phage terminase small subunit  28.76 
 
 		 161 aa  47.8  0.00006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.253906  n/a   
 
 
-
 
NC_010623  Bphy_3398  P27 family phage terminase small subunit  29.17 
 
 		 158 aa  47  0.00009  Burkholderia phymatum STM815  Bacteria  normal  0.096573  hitchhiker  0.0000000756325 
 
 
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NC_010625  Bphy_7138  P27 family phage terminase small subunit  26.24 
 
 		 152 aa  46.6  0.0001  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00058611 
 
 
-
 
NC_013037  Dfer_5504  phage terminase, small subunit, , P27 family  28.32 
 
 		 144 aa  45.8  0.0002  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_2968  phage terminase small subunit  30.56 
 
 		 170 aa  45.1  0.0003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0622  phage terminase, small subunit, , P27 family  30.58 
 
 		 165 aa  44.3  0.0005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009513  Lreu_0669  P27 family phage terminase small subunit  26.83 
 
 		 154 aa  44.3  0.0005  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1630  hypothetical protein  30.09 
 
 		 145 aa  44.3  0.0006  Delftia acidovorans SPH-1  Bacteria  normal  0.299301  normal  1 
 
 
-
 
NC_011094  SeSA_A4461  putative phage terminase, small subunit, P27 family  23.7 
 
 		 154 aa  42  0.003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  hitchhiker  0.00000187625 
 
 
-
 
NC_014150  Bmur_1314  Phage terminase small subunit-like protein  21.93 
 
 		 132 aa  42  0.003  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_1698  Phage terminase small subunit-like protein  21.93 
 
 		 132 aa  42  0.003  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_2274  Phage terminase small subunit-like protein  21.93 
 
 		 132 aa  42  0.003  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_3882  phage terminase, small subunit, putative  26.67 
 
 		 155 aa  41.2  0.005  Pseudomonas putida KT2440  Bacteria  normal  0.686092  hitchhiker  0.00346128 
 
 
-
 
NC_012791  Vapar_2470  phage terminase, small subunit, , P27 family  28.24 
 
 		 163 aa  40  0.009  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
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