Gene CPR_C0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_C0016 
Symbol 
ID4206690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008265 
Strand
Start bp17858 
End bp18379 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content28% 
IMG OID 
Productphage terminase, small subunit, P27 family 
Protein accessionYP_699945 
Protein GI110804034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones96 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAC AAAGAGAACC AACTGATTTA GTAGTTTATA AAGGTAGAAA ACATTTGACA 
AAATCAGAGA TTGAAGAGCG AAAAAGCAAA GAAATAAAAG CACCAAATGA TAAAATAAAA
GCACCAGCTT ACTTATCTAA AAATGAGAAA AAAGAGTTTA ATAAGATAGC AAAAGAATTA
ATAAAGATAG GAATTATGTC TAATTTAGAT ATAGATTCAC TATCTTTTTT TATTAAAACA
AGAGCTGAAT ATTTAAGAAT AACTAAAGAA GTTGAGATAA GAGGGCCAAC AGTAGAAGTA
GAAGTTGAGG ATAAAGATCC TGAAGGAAAA GTAATTGGAA TGAAAAAAAT AGAGATTATA
AATGATGATT ATGAAAGGTT GTTAAAATTA CAACTTAAGG TTTTAACAGC TTGTAGAAAG
ACAGCTGCTG ATTTAGGTTT AAGTATAGCA AGTAGATGTA GATTAGTTGT TCCTACATCA
AAGGAAGAAC AAAAAGAAAA TAAATTCAAG AAATATTTAT AG
 
Protein sequence
MAGQREPTDL VVYKGRKHLT KSEIEERKSK EIKAPNDKIK APAYLSKNEK KEFNKIAKEL 
IKIGIMSNLD IDSLSFFIKT RAEYLRITKE VEIRGPTVEV EVEDKDPEGK VIGMKKIEII
NDDYERLLKL QLKVLTACRK TAADLGLSIA SRCRLVVPTS KEEQKENKFK KYL