45 homologs were found in PanDaTox collection
for query gene Nham_1201 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_1201  acylneuraminate cytidylyltransferase  100 
 
 
241 aa  494  1e-139  Nitrobacter hamburgensis X14  Bacteria  normal  0.603895  n/a   
 
 
-
 
NC_007406  Nwi_0645  acylneuraminate cytidylyltransferase  85.48 
 
 
241 aa  419  1e-116  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.509134  normal 
 
 
-
 
NC_008346  Swol_0201  hypothetical protein  38.82 
 
 
267 aa  146  2.0000000000000003e-34  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2230  acylneuraminate cytidylyltransferase  34.44 
 
 
246 aa  146  3e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1328  acylneuraminate cytidylyltransferase  35.66 
 
 
245 aa  138  7.999999999999999e-32  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0135  acylneuraminate cytidylyltransferase  34.87 
 
 
252 aa  137  1e-31  Nitrosopumilus maritimus SCM1  Archaea  n/a    unclonable  0.0000000000000052261 
 
 
-
 
NC_007954  Sden_3112  acylneuraminate cytidylyltransferase  37.96 
 
 
246 aa  136  3.0000000000000003e-31  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0583  acylneuraminate cytidylyltransferase  38.17 
 
 
256 aa  132  5e-30  Ralstonia pickettii 12D  Bacteria  normal  0.267096  normal 
 
 
-
 
NC_013411  GYMC61_3211  acylneuraminate cytidylyltransferase  33.74 
 
 
241 aa  126  3e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_1771  acylneuraminate cytidylyltransferase  36.73 
 
 
243 aa  123  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.360914  n/a   
 
 
-
 
NC_007298  Daro_1245  aminotransferase  35.56 
 
 
675 aa  123  3e-27  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_0340  acylneuraminate cytidylyltransferase  34.27 
 
 
288 aa  120  1.9999999999999998e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.170558 
 
 
-
 
NC_009767  Rcas_0776  acylneuraminate cytidylyltransferase  38.27 
 
 
212 aa  119  3e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.885113 
 
 
-
 
NC_013522  Taci_0677  acylneuraminate cytidylyltransferase  36.18 
 
 
264 aa  119  4.9999999999999996e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.748582  n/a   
 
 
-
 
NC_010338  Caul_2891  acylneuraminate cytidylyltransferase  35.74 
 
 
239 aa  118  9.999999999999999e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.022912 
 
 
-
 
NC_007513  Syncc9902_0092  glutamate-1-semialdehyde aminotransferase-like  33.33 
 
 
682 aa  117  1.9999999999999998e-25  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1966  acylneuraminate cytidylyltransferase  37.24 
 
 
261 aa  115  3.9999999999999997e-25  Maricaulis maris MCS10  Bacteria  normal  0.333673  normal 
 
 
-
 
NC_013595  Sros_1198  acylneuraminate cytidylyltransferase  33.47 
 
 
244 aa  115  5e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.474804 
 
 
-
 
NC_007513  Syncc9902_0093  hypothetical protein  29.83 
 
 
244 aa  110  2.0000000000000002e-23  Synechococcus sp. CC9902  Bacteria  normal  0.049709  n/a   
 
 
-
 
NC_011146  Gbem_3727  acylneuraminate cytidylyltransferase  36.67 
 
 
234 aa  97.1  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0454  acylneuraminate cytidylyltransferase  31.84 
 
 
593 aa  96.7  3e-19  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01580  spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase  33.6 
 
 
246 aa  96.3  4e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0275127 
 
 
-
 
NC_010338  Caul_0063  acylneuraminate cytidylyltransferase  31.36 
 
 
234 aa  84.7  0.000000000000001  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0413  acylneuraminate cytidylyltransferase  33 
 
 
225 aa  83.2  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.613322  normal  0.318214 
 
 
-
 
NC_008347  Mmar10_1973  acylneuraminate cytidylyltransferase  35.14 
 
 
242 aa  82  0.000000000000007  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0366  acylneuraminate cytidylyltransferase  34.29 
 
 
453 aa  80.5  0.00000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.592907  normal  0.873597 
 
 
-
 
NC_011772  BCG9842_B1721  spore coat polysaccharide biosynthesis protein SpsF, putative  28.92 
 
 
324 aa  79  0.00000000000007  Bacillus cereus G9842  Bacteria  normal  0.128501  hitchhiker  0.000000384945 
 
 
-
 
NC_014150  Bmur_0248  acylneuraminate cytidylyltransferase  31.34 
 
 
224 aa  78.2  0.0000000000001  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2209  acylneuraminate cytidylyltransferase  31.03 
 
 
228 aa  75.9  0.0000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.441808  n/a   
 
 
-
 
NC_013223  Dret_0616  acylneuraminate cytidylyltransferase  27.38 
 
 
611 aa  74.7  0.000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0678473 
 
 
-
 
NC_008751  Dvul_2634  acylneuraminate cytidylyltransferase  29.33 
 
 
227 aa  73.6  0.000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3679  spore coat polysaccharide biosynthesis protein FlmC  28.08 
 
 
282 aa  72.4  0.000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1137  polysaccharide biosynthesis protein, CMP-KDO synthetase-like  28.3 
 
 
242 aa  70.1  0.00000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1893  acylneuraminate cytidylyltransferase  30.52 
 
 
231 aa  69.3  0.00000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008816  A9601_14261  hypothetical protein  28.44 
 
 
240 aa  68.9  0.00000000007  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3732  acylneuraminate cytidylyltransferase  29.83 
 
 
250 aa  66.2  0.0000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_16990  3-deoxy-manno-octulosonate cytidylyltransferase  33.33 
 
 
266 aa  65.9  0.0000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2965  acylneuraminate cytidylyltransferase  26.1 
 
 
568 aa  63.5  0.000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1399  acylneuraminate cytidylyltransferase  25.7 
 
 
568 aa  61.6  0.000000009  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4298  acylneuraminate cytidylyltransferase  33.12 
 
 
237 aa  61.2  0.00000001  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2366  acylneuraminate cytidylyltransferase  31 
 
 
235 aa  60.8  0.00000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0289371  hitchhiker  0.00290087 
 
 
-
 
NC_002967  TDE1917  cytidyltransferase-like protein  29.52 
 
 
876 aa  53.5  0.000003  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00878839  n/a   
 
 
-
 
NC_004347  SO_3269  cytidyltransferase-like protein  25.39 
 
 
574 aa  50.8  0.00002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_0421  spore coat polysaccharide biosynthesis protein FlmC  37.17 
 
 
611 aa  48.5  0.00008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0149  acylneuraminate cytidylyltransferase  27.66 
 
 
247 aa  43.9  0.002  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00000000175858 
 
 
-
 
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