Gene Nham_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1201 
Symbol 
ID4032292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1357926 
End bp1358651 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content56% 
IMG OID637969684 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_576493 
Protein GI92116764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.603895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAATG AAGTTGTAAT CATCACTCAG GCGCGCATGA CGAGCACTCG TCTCCCGGGC 
AAGATCTTGA TGCGCGCCGG GGAACGTACA CTTCTTGAAA CGCATCTCGA TCGCCTCGCC
GATGTCGGCG TGCCCGTGAT CGTCGCGACG ACAACGAATC TCTCCGACGG TCCCGTTGTC
GAACTTTGCG CCGCACTCGA CGTTCCGGTA TTTCGCGGCA GTGAGAATGA CGTACTGGAA
CGTTACCAAA GAGCGGCGCG CGCACACGAG GCTCGCCACG TAATCCGCGT GACGTCGGAC
TGCCCACTCA TCTGTCCAGA CGTGATTTGC GCCGGCCTCG ACGTCTATTT GGGCTTGAAG
AGCGAGTCCA TTTATCTCTC GAACGGCGAA AGGCGGACCT ATCCTCGCGG CATGGATTTC
GAAATTTTTT CCCGACGCTC GCTCGACTTC GCCGCGGAGC ATGCCAGGCT TCCGTCCGAG
CGCGAGCATG TGACAGGTTG TATTCGCACG TCGATGCCAG ATATTCGCCA CGAGCACTGC
ACGGATGAAG AAGATCTCAG CGACTGGCGC ATCACCGTCG ACACCGTCGA CGACTTCAAA
CTCGCCAAAC TTTTGATTGA AGACCATCAT GCGGCCGAGA TGGATTACCC GGGCTTAAAG
GCTTTGCTGA AAGCGCACCC GGAGCTCATG AAAATCAACT CTCACATTCA ACAGAAACCG
ATCTAA
 
Protein sequence
MPNEVVIITQ ARMTSTRLPG KILMRAGERT LLETHLDRLA DVGVPVIVAT TTNLSDGPVV 
ELCAALDVPV FRGSENDVLE RYQRAARAHE ARHVIRVTSD CPLICPDVIC AGLDVYLGLK
SESIYLSNGE RRTYPRGMDF EIFSRRSLDF AAEHARLPSE REHVTGCIRT SMPDIRHEHC
TDEEDLSDWR ITVDTVDDFK LAKLLIEDHH AAEMDYPGLK ALLKAHPELM KINSHIQQKP
I