| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0616 |
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| Symbol | |
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| ID | 8418428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 738994 |
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| End bp | 740829 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645037184 |
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| Product | acylneuraminate cytidylyltransferase |
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| Protein accession | YP_003197491 |
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| Protein GI | 258404749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0678473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCTG TAATCGCCAT CATCCAGGCC CGTATGGGCT CTTCAAGACT GCCCGGCAAA
ATGATGCTTC CCCTGGCAGG CAAGCCAATT ATTGACTATG TCTTGATGCG GTTATCCACT
GCCTTGCGCC CCCAGGGCAT GCTTGATTCC CTGGTCCTGG CTACATCTAC TGAAAAAAAC
AATGACCCCT TGGTAGATCA TGTAGCTGTC CACTGGCCGC AGGTTAAAAT CATCAGGGGA
GCAGAAGATG ACGTCTTGTC CAGGTTCAAG ACTGCCATTG ATGAAACCGG TGCAGATATC
ATTGTCCGCG CTACAGGAGA TTGCCCGTTT GTCAATATTG ACGCCATGCA CAATATGCTG
ACTGAGCTAC TCAATTCAGG TGCCGATATA GTCAATTACC AGCCCGGCTA TGAATATGTG
GACAAAGGGC TGGAGGTGGT GAGAGCCGAT GCCTTGCTGC GAGCTTTAAA TGATCCTGAA
CCGACGTCCA TGGATAGAGA GCATGTCACC AGCCTCCTTT ATAAGCATCC TGACCGATAT
AAGGTCCAAT ACGTTCAAAG CGCCCCTGAA CTGCGCCGCG GGGATATCAG GCTGACCATT
GATACGCCCG CTGATCTTGA GTTTTTTGAA ACGCTCTTTC AAGAGCTACA GGAAGAAAAT
ATCGCCACAA TATCCCCGCA AGATATTGTG GAGGTGCTGA ATAGAAAACC GGAGCTTAAA
AGCATAAACG CCTCAAGTGG CCGCAAAAGC ACAAGACACG AGCGTGCTCG GCTGGGATTT
CGATGTGACG GTGGAACGGA AATAGGTCTT GGGCATGTTG TGGGCTCCAT CCGCCTGGCT
AGGTTGCTGA GCAAAGAGCT TGGTCTCGGG GTGGAATTCG TGGTTCGCGA AAACCAGGCA
ACCCAAAATC TCATCCACGA GGCAGGCTTC GCCATGGAAG TACTGCCCAA ACAAATATCA
CCCGAAGATG ATATCGGCCG ATTGGTTGAA AAGAAGCTTG AATCAGACTT GTCAGGCGTG
GTCATCAATT TCTGCAAAGA GGATCTGGAA AGATATACCA CTTATTTTCA AGCCATAAAA
GAAAGCGGCC TAAAGCTTAT ATTCATGGAC AATCCCCTGC CCCCCTCATG GGAGATGGGG
GATCTTTTGA TCAACGCTCT GCCCCATCCG GAATATAATG GATACGATCC CAATAGACAC
CCGGCCTGTC TTGATGGTTT GGAATATTTT ATTCCAGGAT TTGAAGGCTC ACCACCTGAG
CGAGTGATAA GATCTAGTGT CCAAAGGGTC CTGATTGCCA TGGGTGGTGC GGACAAGCCC
AATCTCACGG AAATGGTTGT CAAAGCCTTG GCTGAGACGA ACTTTAAAGG CTATGTCGAT
GTGGTTCTAG GCTCTGCATG CTTCCATTTC GAATCTGTTC AGAAAAGTCT GAAAGCGTCA
GGACTAAACG GCGATGTCAG TCAGAATGTT TCAGATTTGT ATAGGAGAAT GTGCCTTGCT
GACCTCGCTT TTTCCGGTCT CGGACTGACA ACCTATGAAA TGGCCTATAC CGGCTTGCCG
GTCTGTATTA TTTCCAGCTC AGAATTAAAC GCAAAAGCAG CGGAACAGTA TGTCCAAAAC
TATAGGGCCG CTGAGCATAT TGGTTTTTAC AGAAATGTTG ACCAGAACCT CATCTCGTCC
CGGTTTTCCA AGCTTATGAA TGGCCAGGGA AAAAGGCTTA ACCTATCCAG TGTCGAGTAT
CGCGTAGGCA AAAAGGTTGA TCAAGTTGTG TTTTCAGTTA GCTCGGTTCT TAATTTATTC
AAACCTGGCA ATTCAAAGCA GGAGATGACA AATTGA
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| Protein sequence | MSSVIAIIQA RMGSSRLPGK MMLPLAGKPI IDYVLMRLST ALRPQGMLDS LVLATSTEKN
NDPLVDHVAV HWPQVKIIRG AEDDVLSRFK TAIDETGADI IVRATGDCPF VNIDAMHNML
TELLNSGADI VNYQPGYEYV DKGLEVVRAD ALLRALNDPE PTSMDREHVT SLLYKHPDRY
KVQYVQSAPE LRRGDIRLTI DTPADLEFFE TLFQELQEEN IATISPQDIV EVLNRKPELK
SINASSGRKS TRHERARLGF RCDGGTEIGL GHVVGSIRLA RLLSKELGLG VEFVVRENQA
TQNLIHEAGF AMEVLPKQIS PEDDIGRLVE KKLESDLSGV VINFCKEDLE RYTTYFQAIK
ESGLKLIFMD NPLPPSWEMG DLLINALPHP EYNGYDPNRH PACLDGLEYF IPGFEGSPPE
RVIRSSVQRV LIAMGGADKP NLTEMVVKAL AETNFKGYVD VVLGSACFHF ESVQKSLKAS
GLNGDVSQNV SDLYRRMCLA DLAFSGLGLT TYEMAYTGLP VCIISSSELN AKAAEQYVQN
YRAAEHIGFY RNVDQNLISS RFSKLMNGQG KRLNLSSVEY RVGKKVDQVV FSVSSVLNLF
KPGNSKQEMT N
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