Gene Nwi_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0645 
Symbol 
ID3676221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp726120 
End bp726845 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content56% 
IMG OID637712196 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_317263 
Protein GI75674842 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.509134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATG AAGCCGTCAT CATTACTCAG GCGCGCATGA CAAGCACTCG CCTTCCGGGC 
AAGATCTTGA TGCGCGCCGG CGAGCGCACC CTTCTCGAAA CGCATCTCGG TCGCCTCGCC
GAGGTCGGCG TTCCCGTGAT CGTCGCGACG ACAACGAATC AGTCCGACAA CCCTGTCGTC
GAACTCTGCG CCGCACTTGA CGTTCCGGTG TTCCGAGGCA GCGAGAATGA CGTACTGGAA
CGTTACCAAG GAGCGGCGCG CGCGCACGAG GCTCGCCATG TGATCCGCGT GACGTCGGAC
TGCCCTCTCA TCTGCCCGGA GTTGATCCGT GCTGGCCTCG ATATCTATCT GAGCTTGAAG
AGCAGATCCG TTTATCTCTC GAACGCGGAG AAACGGACCT ACCCCCGCGG CCTGGATTTC
GAAATTTTTT CCCGACGTTC ACTGGACTTT GCCGCGGAGA ACGCGAGGCT ATCGTCCGAG
CGCGAGCATG TGACAAGTTA TATTCGGACA TCGATGCCGG ATATTCACCA CGAGTCCTAC
ACGGATCAAG ACGATCTCAG CGACTGGCGC ATCACCGTCG ACACCGACGA CGACTTCAAA
CTCGTCAAAC TTTTGATTGA ACATCATCGT GCGGCGGAGA TGGATTACGC TGCCTTAAAG
GCTCTTCTGA AAGCACATCC GAGGCTCATG ACAATCAACT CTCACATTCA ACAGAAAACC
ATCTAA
 
Protein sequence
MSNEAVIITQ ARMTSTRLPG KILMRAGERT LLETHLGRLA EVGVPVIVAT TTNQSDNPVV 
ELCAALDVPV FRGSENDVLE RYQGAARAHE ARHVIRVTSD CPLICPELIR AGLDIYLSLK
SRSVYLSNAE KRTYPRGLDF EIFSRRSLDF AAENARLSSE REHVTSYIRT SMPDIHHESY
TDQDDLSDWR ITVDTDDDFK LVKLLIEHHR AAEMDYAALK ALLKAHPRLM TINSHIQQKT
I