Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1917 |
Symbol | |
ID | 2740415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1934854 |
End bp | 1937484 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637160803 |
Product | cytidyltransferase-like protein |
Protein accession | NP_972520 |
Protein GI | 42527422 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00878839 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGTT TATACGAAGG AACGGCTGTA ATTGTTCAAG CTCGATTAAG TTCCAAGCGT TTGGTTAGAA AGGCTTTGTT GGACTTGGGC GGCATGCCTA TATTATACAG GGTTTTGGAT TCGGTTAGAG AATTACCTGC CGAACATTTT ATTTTGGCCT GTGATACCAA TTCAAAAAAA GAATTTCAGC CCATAGCCGA ATCCTTAGGC TATCTTTGTA TTGACGGTTC CGAAGAAGAT GTTTTAAGGC GTTTTTGTGA TGCCGTTGAG TTTATAAATT CCAATTTTCC GAATAGACCT TTAAAGGCCG TTATCAGGGT TACAGCCGAT AATCCGTTTC TTTTTGTACA AGCTGCCGAA GCTTCAATCC GCCGTTATTT TGAATTGGGA GAGCCCGATT ATTTTACTTA CACAGGTCTT CCTCACGGAT CGGGAATAGA AATTATCAAG GCCGATTCTC TTTTAAAAGC CGCTTCCGAA ACCGATGACG AATATGCTCA TGAGCATGTG TCTCCTGCAA TTTACGGACA TTCCGATAAA TATAGGTGTG TCAGAGAGAC AGCTCCGCCT GTGTGGTATT ATCCCGAACT GCGGACTACC GTTGATACCG CCGAAGACTA TGAAAAAGCA AAAGAAATTT ATAAGCACTT AATTTCAAAT AAAAAGGCGG TTCCGTTTAC GCCTGCCGAC ATAGTTGAGG CTGTAAGTTA TGCCGACAGA TTGGTTGTAT TCTGTCCCTC GGTTACTCCG GGGCGGGGAA GCGGACACTT GCACAGGGTT TGCGATTTAG CGCGATCTCT TTTGGGAAAG TTAAGATGTT TGATTTATAT ATCCGAGTCG GATTATCCTA ATTTTTCAAA ATCTCTTTTA AATTCCATTC CTTCCGAAAT AGTCGTAAAT GAGTTTCCAA AAAAAGCGGC ACTAATCGTA TTGGACAGAT TTAGAACATC TGAAGATGAG ATGGCTTTTT TTAAAAATAG GGGGCATGTT ATCGCAATTG ACGATGGCGG CTCCGGCCGA AGATTTGCCG ATTTTATTTT GGATATATTA CCTTCACTTA AAAATGTAAG CTCGTCTGAC GATGATTCCG GCTCTGAATG GCTTTCTAAT CTTTTTTCGC CTGAGTTGAT ATCCCTTCCG GTAAATAGGC GAAAGCTCCT TTCAACTCAG AGATTGGCAA AAAATAAAAA GATACACTTA ACTCCTAAAC AAACAAAGGT TCTTGTAGTT TGCGGAGGGG AAAATTCTTA TAGGATGACC CTTCCAATTG CACAAATTCT AGCCTCCTTA AAATTCGATG TTTCTGCAAT AGATATAAAT TTAGGTTTTG AAGATATAAA ACGGCTTGAA GGAAAGGTTA AAGCTTTTTC AAGAATTGAT AACTTAAAAG AGAGACTTTA TGAATGGGAT TTGGTTGTAA CTCATTATGG GTTCATTGCC TTTGAAGCCT TGGCTGCAGG CTGTTATGTG CTTTTGGTTT CTCCTACCGA CTATCATTAT AAGTTAGGTT TAGCCGCCGG CTTTACATCT CTTCCTGCCG GGATACCTTC CAGTACCGAC TTTGCTAATG TCTTTTCTCA TGGAATTAAG ATACCTAAAA TTATTACACC TTATTCTGAA TCCAAGGATT TATATTCCTT GATAAAAAAT TTGTCTTTCG GTTCACGGTA TCTCTGTCCT ATTTGCGGGG AAGCCGGTAC CTCCGAAGTT ACGGCCAGAA CTCCCGATAG GACTATGGCA CATTGTTTAA AGTGCGGAAT GTATCATATT TCTTTTATAA TAAGTCCTCC AAAACAATAT ACCAAAACTT ATTTTTTTGA TGAGTATAAG GCCCAATACG GTAAAACCTA CTTAGAGGAT TTTGAGTCTA TAAGAAAGCA GGGTATGCGC CGAATGGAAA TTATCGATAA ACTTTATATA GATATTTTTT ATCGAAAAAG GGAATACAGT ATTTTTGACG GTGAAAAGAA AATATTGGAT ATAGGCTGTG CTTACGGCCC CTTTGTTCTT GCTGCAAAGT ATTCGGGTTG GTATGCCGTC GGAACCGATA TTTCGGAAGC CGCCGTAAAA TATGTAACGG ACGAGTTAAA ACTGCCGGCC TTTGTTTCGG CTTTTCCGGT TCTCCCGAAA TCCTATGAGT ATATTTACCA AAAACGAATG ACGGGAAACG GGTTTGAATC GGTTTCAAGA CCTATTGAAG ACGGAGGTTT TGCGGCCCTT TCTATGTGGT TTGTTATCGA GCATTTTAGG GACTTGGATT CGGTTTTAAA AAAAGTAAAC GATCTTTTGA TGCCGGGCGG TATTTTTGCT TTTTCAACTC CGAACTTTTC CGGCGTTACG GGAACTTTTT CGCCTTATAA ATTTTTTGCA GAAAGTCCTA CCGACCATTA TTCCATATGG GATTCAAGAA CTGTAAGGTC TCAGCTCAGT ATGTACGGCT TTAAAGTTTT AAAGGTTGTT TCGATAGGTC ATCATCCTGA AAGATTTAAG TGGTGTAAAA ATCTTAAAAA GAACGGAATA CTTTGGAACA TAGTTATGGC CATAGGCATG GCTATAAGCA AACTTTTTAA ACTCGGAGAC AGTATGGAAG TTTATGCAAT GAAGCAGGGA AGACTGGAGG ATATAAAATG A
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Protein sequence | MIGLYEGTAV IVQARLSSKR LVRKALLDLG GMPILYRVLD SVRELPAEHF ILACDTNSKK EFQPIAESLG YLCIDGSEED VLRRFCDAVE FINSNFPNRP LKAVIRVTAD NPFLFVQAAE ASIRRYFELG EPDYFTYTGL PHGSGIEIIK ADSLLKAASE TDDEYAHEHV SPAIYGHSDK YRCVRETAPP VWYYPELRTT VDTAEDYEKA KEIYKHLISN KKAVPFTPAD IVEAVSYADR LVVFCPSVTP GRGSGHLHRV CDLARSLLGK LRCLIYISES DYPNFSKSLL NSIPSEIVVN EFPKKAALIV LDRFRTSEDE MAFFKNRGHV IAIDDGGSGR RFADFILDIL PSLKNVSSSD DDSGSEWLSN LFSPELISLP VNRRKLLSTQ RLAKNKKIHL TPKQTKVLVV CGGENSYRMT LPIAQILASL KFDVSAIDIN LGFEDIKRLE GKVKAFSRID NLKERLYEWD LVVTHYGFIA FEALAAGCYV LLVSPTDYHY KLGLAAGFTS LPAGIPSSTD FANVFSHGIK IPKIITPYSE SKDLYSLIKN LSFGSRYLCP ICGEAGTSEV TARTPDRTMA HCLKCGMYHI SFIISPPKQY TKTYFFDEYK AQYGKTYLED FESIRKQGMR RMEIIDKLYI DIFYRKREYS IFDGEKKILD IGCAYGPFVL AAKYSGWYAV GTDISEAAVK YVTDELKLPA FVSAFPVLPK SYEYIYQKRM TGNGFESVSR PIEDGGFAAL SMWFVIEHFR DLDSVLKKVN DLLMPGGIFA FSTPNFSGVT GTFSPYKFFA ESPTDHYSIW DSRTVRSQLS MYGFKVLKVV SIGHHPERFK WCKNLKKNGI LWNIVMAIGM AISKLFKLGD SMEVYAMKQG RLEDIK
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