Gene Cthe_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2230 
Symbol 
ID4809968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2657874 
End bp2658614 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content38% 
IMG OID640107636 
Productacylneuraminate cytidylyltransferase 
Protein accessionYP_001038625 
Protein GI125974715 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GGGCTGTTGT ACAAACAAGA ATGGGCTCAA CACGACTGCC CGGCAAGGTT 
ATGATGAATT TATGCGGCAA GCCGGTAATA GACCATGTGA TAGACAGGCT GAAGCAGTCA
AAGCTTTTGG ATGATATAAT TATTGCAACC ACTACATCGG AGAAAGACAA GGTAATAGTG
GAACAGGCGA AAAAAAACGG GGTAAAATGG TTTTGCGGCA GTGAAGAAGA TGTGTTGTCA
AGGTATTATT ATGCGGCAAA AGAAAACAAC CTTGATACAG TTGTTCGTAT TACTTCGGAC
TGTCCGCTGA TTGATCCTGT GCTTTTGGAT AAAGTGGTGG AATTTTATTT TTCAGGCAAT
TATACGTTGG TAACCAATGC AGGAAATGAT TTGACCCAGA GAACATATCC CAGAGGGCTT
GATGTTGAGG TATTTTCCTT TAAAGTACTG GAAGATGCCT TTAATAATGC TGATAAAAGC
TATCAGAGAG AGCATGTTAC TCCCTATATG TATGAAACTT ATGGTCAAAG TGTATACTAC
TATAAAAATA ACACGGATTA TTCCAATCTC AGATGGACAC TGGATACAAT CGAAGACTTT
GAGTTGATTG CAATAATTTA TGATAAATTA TATGACAAAT ATAACGGAAA ATTCGGATTT
GAAGAAGTAC TGGAATTTAT AAAATCCAAT CCGGAACTTT GCAAAATCAA TGCACATGTT
GAGCAGAAAA AAGTGATGTG A
 
Protein sequence
MKTGAVVQTR MGSTRLPGKV MMNLCGKPVI DHVIDRLKQS KLLDDIIIAT TTSEKDKVIV 
EQAKKNGVKW FCGSEEDVLS RYYYAAKENN LDTVVRITSD CPLIDPVLLD KVVEFYFSGN
YTLVTNAGND LTQRTYPRGL DVEVFSFKVL EDAFNNADKS YQREHVTPYM YETYGQSVYY
YKNNTDYSNL RWTLDTIEDF ELIAIIYDKL YDKYNGKFGF EEVLEFIKSN PELCKINAHV
EQKKVM