| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2965 |
|---|
| Symbol | |
|---|
| ID | 4845836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3479160 |
|---|
| End bp | 3480866 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640120213 |
|---|
| Product | acylneuraminate cytidylyltransferase |
|---|
| Protein accession | YP_001051316 |
|---|
| Protein GI | 126175167 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAG CCCTTGCAAT TGTTGGTGCT CGCCTTAACT CTAGTCGTCT CGCAGGCAAA
CACTTATTAG AGCTCGCAGG GAAGCCGCTT ATTGAACAGT TATGGCGCCG CCTAACATTG
TGCCAAGAGG TTAATAGTTT TGAACTGGCG ACCACTGCTG ATGATTTTAA TAAACCTCTC
ATTAATTGGG CACATGCCCA CCAAATTTGT TGCCATCCTT TTGAAGGAGA TGTTAACGAT
CTAATGGCAC GACTCGATAA CATTATCCAA AGACAAGCAC CTGACTTTAT TATCTATATT
TGCGGTGATT GCCCACTCAT TGCTCCTGAT TTTATCGATT ATGCCCTGAC AAGGCTTAAG
GCTTCGGGCA AAGACAGCAT CAAACTCCAT GATGGAGTCA TCTCTATTCA CGAAGGCATG
GCATTTTACA GTCGCAAAGG ATGGGGAAAA CTGATGTCTG TAAGCCAATG TGCCATGTCG
AGGGAGCACG TGGGCTACGC GGATAGAATC ACCCCAGTGC TTGACTACTT AAGTATTCCC
GATAGCGCAA ATTATTCGCA GATAAAACAC CGAATATCAG TAGATACCCA AGCAGACTAT
CGCTTTATGG AAGAAGTGTA TCGCCGTTGG TACAAGATCC ATACTGTAGA CACCATCGTC
AGCCTAGTAT GGGTGCAACA ACAGTTATTA GAAGATCCAA TGCTAGCGGC TATCAACAAT
CATGTGAAAC AAAAAGCGGC AAATAAACTT TACGCAAAGG CCAGTATCTA TTGCCATCTA
GGACCCTCTA TTGGCTTGGG ACATTACAAG CGGTCCAAAT TGATTGCCGA TGCATTGCAA
GAGTATCTTG GAATTGGGGC CATAGTACAC GTCCAATATG AAGGACCGCA GCTTGAAAAA
ACATCACCCC GACTTCACTG GTATAAGAAT GAAAATGAGT TGCTGAAAGC CATGATTTTG
GATCCAAATC CACTCATTGT ACTTGATCTA CATCCAGACT TTATTTCACT ACCAGCACTT
AGAAAGACAC TCCAGCCACT CGGAGATAAA AACACAAAAA TTGTAGGAAT AGATAAACTC
ATATCAATAA TCGATGAGCT AGATTGGTTA TTTATCCCTA GCTTCAATAA TTCATTTCAG
CATCCTAAGG TCTCTGTCGG CTGGCAAAAC TATCTATTTC CTTCAATGCT ACAACAAACA
AAGAAACACC AAATTCTTGT ATTGACAGGT GGCAGTGATG CACTCGATTA CGGCACCATT
TTACCCACGC TACTATCAAA ACTTTGTACT GATTGGCCTA TTATTTGGGT ACAAGGGCCA
CTGGCTCCCC CCCCCTTATT GCCATTAAGC TCCACAATAA GTGTACTGAC AGATCCCGAT
GATCTTCATG AGTTAATCGC AGAGTCAGAA ATCATTTTAA CTTGCTATGG CTTGTCACTA
TTCGAATCCA TCTTCTCAAG TGCTGCTAGC ATATTACTCC CGACACAACA TTTGTGTGAT
AGCGTAGAAC TCGAATTGCT TATCAAAGAG CACTGCTGCC TTACGAGTAG TTCCCTTCCT
GATGCGATCT CAAAACTTGA AGCTTTATTG AGTGATTGTA ACGCAAGACA AAAACTACAA
AAAGAAGCAA GCAGAGTATT TAACGACCAC GCTGGTATGA TAAATCTAAT GGAAGATATT
CAACGGCTAT TGGAACAAAG TGTCTAG
|
|---|
| Protein sequence | MSKALAIVGA RLNSSRLAGK HLLELAGKPL IEQLWRRLTL CQEVNSFELA TTADDFNKPL
INWAHAHQIC CHPFEGDVND LMARLDNIIQ RQAPDFIIYI CGDCPLIAPD FIDYALTRLK
ASGKDSIKLH DGVISIHEGM AFYSRKGWGK LMSVSQCAMS REHVGYADRI TPVLDYLSIP
DSANYSQIKH RISVDTQADY RFMEEVYRRW YKIHTVDTIV SLVWVQQQLL EDPMLAAINN
HVKQKAANKL YAKASIYCHL GPSIGLGHYK RSKLIADALQ EYLGIGAIVH VQYEGPQLEK
TSPRLHWYKN ENELLKAMIL DPNPLIVLDL HPDFISLPAL RKTLQPLGDK NTKIVGIDKL
ISIIDELDWL FIPSFNNSFQ HPKVSVGWQN YLFPSMLQQT KKHQILVLTG GSDALDYGTI
LPTLLSKLCT DWPIIWVQGP LAPPPLLPLS STISVLTDPD DLHELIAESE IILTCYGLSL
FESIFSSAAS ILLPTQHLCD SVELELLIKE HCCLTSSSLP DAISKLEALL SDCNARQKLQ
KEASRVFNDH AGMINLMEDI QRLLEQSV
|
|---|
| |