More than 300 homologs were found in PanDaTox collection
for query gene Gbro_4519 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_4519  acyl-CoA dehydrogenase domain protein  100 
 
 
403 aa  824    Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1886  acyl-CoA dehydrogenase domain-containing protein  58.1 
 
 
398 aa  480  1e-134  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0834  acyl-CoA dehydrogenase domain protein  56.22 
 
 
401 aa  393  1e-108  Conexibacter woesei DSM 14684  Bacteria  normal  0.850289  normal  0.956057 
 
 
-
 
NC_013440  Hoch_1654  acyl-CoA dehydrogenase domain protein  51.79 
 
 
392 aa  378  1e-103  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3958  acyl-CoA dehydrogenase domain-containing protein  51.03 
 
 
426 aa  361  1e-98  Frankia sp. EAN1pec  Bacteria  normal  0.100239  normal  0.0392738 
 
 
-
 
NC_009379  Pnuc_0013  acyl-CoA dehydrogenase domain-containing protein  45.83 
 
 
415 aa  357  1.9999999999999998e-97  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_35970  Acyl-CoA dehydrogenase  45.5 
 
 
390 aa  346  4e-94  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0367152  hitchhiker  0.0000000000000220506 
 
 
-
 
NC_011992  Dtpsy_0224  acyl-CoA dehydrogenase domain protein  45.43 
 
 
396 aa  345  6e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0230  acyl-CoA dehydrogenase domain-containing protein  46.67 
 
 
399 aa  345  6e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2793  acyl-CoA dehydrogenase family protein  45.5 
 
 
390 aa  342  5e-93  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1814  acyl-CoA dehydrogenase-like protein  45.53 
 
 
391 aa  334  2e-90  Cupriavidus metallidurans CH34  Bacteria  normal  0.0270367  normal  0.034848 
 
 
-
 
NC_012792  Vapar_6219  acyl-CoA dehydrogenase domain protein  45.09 
 
 
387 aa  315  6e-85  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2503  acyl-CoA dehydrogenase domain-containing protein  43.56 
 
 
396 aa  315  7e-85  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0689406  normal 
 
 
-
 
NC_007974  Rmet_4613  acyl-CoA dehydrogenase-like protein  45.67 
 
 
397 aa  308  2.0000000000000002e-82  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4628  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.15 
 
 
397 aa  306  5.0000000000000004e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.383414  n/a   
 
 
-
 
NC_007336  Reut_C6366  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.09 
 
 
398 aa  300  2e-80  Ralstonia eutropha JMP134  Bacteria  normal  0.390023  n/a   
 
 
-
 
NC_007348  Reut_B5288  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.09 
 
 
398 aa  300  2e-80  Ralstonia eutropha JMP134  Bacteria  normal  0.334035  n/a   
 
 
-
 
NC_009511  Swit_1479  acyl-CoA dehydrogenase domain-containing protein  42.74 
 
 
387 aa  290  2e-77  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_1705  acyl-CoA dehydrogenase-like  41.03 
 
 
393 aa  287  2.9999999999999996e-76  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.275944  n/a   
 
 
-
 
NC_009952  Dshi_1004  acyl-CoA dehydrogenase domain protein  42.64 
 
 
405 aa  285  8e-76  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.211368  normal 
 
 
-
 
NC_012029  Hlac_0221  acyl-CoA dehydrogenase domain protein  42.3 
 
 
406 aa  279  8e-74  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.338225  normal  0.0253718 
 
 
-
 
NC_009972  Haur_1560  acyl-CoA dehydrogenase domain-containing protein  38.97 
 
 
405 aa  268  1e-70  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4672  acyl-CoA dehydrogenase domain protein  41.36 
 
 
409 aa  268  1e-70  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4773  acyl-CoA dehydrogenase domain-containing protein  41.36 
 
 
401 aa  265  8e-70  Methylobacterium sp. 4-46  Bacteria  normal  0.999666  normal  0.360352 
 
 
-
 
NC_013743  Htur_2346  acyl-CoA dehydrogenase domain protein  39.23 
 
 
416 aa  265  1e-69  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_4450  acyl-CoA dehydrogenase domain-containing protein  40.37 
 
 
401 aa  262  6e-69  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_3408  acyl-CoA dehydrogenase domain protein  39.54 
 
 
416 aa  260  3e-68  Natrialba magadii ATCC 43099  Archaea  normal  0.256536  n/a   
 
 
-
 
NC_013743  Htur_0944  acyl-CoA dehydrogenase domain protein  37.88 
 
 
430 aa  258  1e-67  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009720  Xaut_0183  acyl-CoA dehydrogenase domain-containing protein  39.16 
 
 
404 aa  253  3e-66  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.292913 
 
 
-
 
NC_014165  Tbis_2518  acyl-CoA dehydrogenase domain-containing protein  36.68 
 
 
426 aa  241  2e-62  Thermobispora bispora DSM 43833  Bacteria  normal  0.0714534  normal 
 
 
-
 
NC_014212  Mesil_2292  Butyryl-CoA dehydrogenase  38.38 
 
 
398 aa  235  1.0000000000000001e-60  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5044  acyl-CoA dehydrogenase domain-containing protein  35.04 
 
 
416 aa  232  8.000000000000001e-60  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3969  acyl-CoA dehydrogenase domain-containing protein  38.74 
 
 
396 aa  232  8.000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.669296  normal  0.426807 
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  35.62 
 
 
414 aa  227  2e-58  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  35.62 
 
 
414 aa  227  2e-58  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  35.62 
 
 
414 aa  227  2e-58  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_009719  Plav_0392  acyl-CoA dehydrogenase domain-containing protein  33.85 
 
 
405 aa  226  5.0000000000000005e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.35321  normal 
 
 
-
 
NC_013441  Gbro_1690  acyl-CoA dehydrogenase domain protein  33.67 
 
 
428 aa  225  9e-58  Gordonia bronchialis DSM 43247  Bacteria  normal  0.505537  n/a   
 
 
-
 
NC_008726  Mvan_0116  acyl-CoA dehydrogenase domain-containing protein  35.93 
 
 
447 aa  225  1e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2480  acyl-CoA dehydrogenase domain protein  41.04 
 
 
397 aa  225  1e-57  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00582345  n/a   
 
 
-
 
NC_009338  Mflv_0734  acyl-CoA dehydrogenase domain-containing protein  35.93 
 
 
418 aa  225  1e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.998726  normal 
 
 
-
 
NC_010552  BamMC406_3221  acyl-CoA dehydrogenase domain-containing protein  35.11 
 
 
414 aa  224  2e-57  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  35.01 
 
 
414 aa  224  3e-57  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  34.85 
 
 
414 aa  224  3e-57  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_5271  acyl-CoA dehydrogenase domain-containing protein  34.85 
 
 
414 aa  222  9e-57  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.166824  normal 
 
 
-
 
NC_013131  Caci_1151  acyl-CoA dehydrogenase domain protein  36.01 
 
 
402 aa  219  6e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.73028  normal 
 
 
-
 
NC_008705  Mkms_0107  acyl-CoA dehydrogenase domain-containing protein  37 
 
 
433 aa  219  7.999999999999999e-56  Mycobacterium sp. KMS  Bacteria  normal  normal  0.363073 
 
 
-
 
NC_009077  Mjls_0088  acyl-CoA dehydrogenase domain-containing protein  37 
 
 
433 aa  219  7.999999999999999e-56  Mycobacterium sp. JLS  Bacteria  normal  normal  0.403775 
 
 
-
 
NC_008146  Mmcs_0098  acyl-CoA dehydrogenase-like protein  37 
 
 
433 aa  219  7.999999999999999e-56  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3864  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
388 aa  218  1e-55  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.264167  normal  0.493803 
 
 
-
 
NC_013595  Sros_5752  acyl-CoA dehydrogenase-like protein  35.29 
 
 
427 aa  218  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.596158 
 
 
-
 
NC_009943  Dole_1921  acyl-CoA dehydrogenase domain-containing protein  34.54 
 
 
400 aa  216  4e-55  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  38.22 
 
 
400 aa  217  4e-55  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  35.91 
 
 
409 aa  215  9e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_014165  Tbis_2699  acyl-CoA dehydrogenase domain-containing protein  35.91 
 
 
404 aa  215  9.999999999999999e-55  Thermobispora bispora DSM 43833  Bacteria  normal  0.401579  normal  0.61 
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  34.01 
 
 
398 aa  214  1.9999999999999998e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  34.48 
 
 
412 aa  213  3.9999999999999995e-54  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  35.41 
 
 
409 aa  212  7e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  34.16 
 
 
403 aa  211  1e-53  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_007908  Rfer_3689  acyl-CoA dehydrogenase-like  32.76 
 
 
424 aa  212  1e-53  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  34.16 
 
 
403 aa  212  1e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  34.17 
 
 
407 aa  211  2e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_009565  TBFG_10155  acyl-CoA dehydrogenase fadE2  38.61 
 
 
403 aa  211  2e-53  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10132  acyl-CoA dehydrogenase fadE1  32.32 
 
 
447 aa  210  4e-53  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.838462 
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  35.41 
 
 
409 aa  210  4e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_008786  Veis_2517  acyl-CoA dehydrogenase domain-containing protein  36.96 
 
 
395 aa  209  5e-53  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1096  acyl-CoA dehydrogenase domain-containing protein  35.75 
 
 
397 aa  208  1e-52  Meiothermus ruber DSM 1279  Bacteria  normal  0.7199  normal  0.106826 
 
 
-
 
NC_009921  Franean1_6921  acyl-CoA dehydrogenase domain-containing protein  33 
 
 
438 aa  208  1e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.858592 
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  35.41 
 
 
409 aa  209  1e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_007511  Bcep18194_B0146  Acyl-CoA dehydrogenase  34.66 
 
 
384 aa  207  2e-52  Burkholderia sp. 383  Bacteria  normal  normal  0.273639 
 
 
-
 
NC_013730  Slin_1392  acyl-CoA dehydrogenase domain protein  34.55 
 
 
424 aa  208  2e-52  Spirosoma linguale DSM 74  Bacteria  normal  0.671392  normal  0.19275 
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  33.76 
 
 
407 aa  207  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_007925  RPC_4699  acyl-CoA dehydrogenase-like  33.74 
 
 
422 aa  207  3e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  34.41 
 
 
402 aa  207  3e-52  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_009921  Franean1_3591  acyl-CoA dehydrogenase domain-containing protein  36.27 
 
 
409 aa  206  4e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.969674 
 
 
-
 
NC_007958  RPD_0767  acyl-CoA dehydrogenase-like  34.85 
 
 
421 aa  206  4e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  35.66 
 
 
409 aa  207  4e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0617  putative acyl-CoA dehydrogenase  32.58 
 
 
429 aa  206  5e-52  Burkholderia xenovorans LB400  Bacteria  normal  0.0764146  normal  0.0773166 
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  35.41 
 
 
409 aa  206  6e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2207  acyl-CoA dehydrogenase domain protein  35.31 
 
 
397 aa  206  7e-52  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.55 
 
 
409 aa  205  1e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_013131  Caci_7442  acyl-CoA dehydrogenase domain protein  34.47 
 
 
417 aa  205  1e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  36.1 
 
 
405 aa  204  2e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  35.41 
 
 
414 aa  204  3e-51  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  33.01 
 
 
407 aa  204  3e-51  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  32.15 
 
 
401 aa  203  4e-51  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3808  acyl-CoA dehydrogenase domain-containing protein  31.19 
 
 
433 aa  203  4e-51  Mycobacterium sp. KMS  Bacteria  normal  0.670394  normal  0.124585 
 
 
-
 
NC_008146  Mmcs_3735  acyl-CoA dehydrogenase-like protein  31.19 
 
 
433 aa  203  4e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2451  acyl-CoA dehydrogenase domain-containing protein  31.91 
 
 
432 aa  203  5e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1019  acyl-CoA dehydrogenase-like  33.5 
 
 
417 aa  203  5e-51  Rhodoferax ferrireducens T118  Bacteria  normal  0.530508  n/a   
 
 
-
 
NC_009077  Mjls_3747  acyl-CoA dehydrogenase domain-containing protein  31.19 
 
 
433 aa  202  7e-51  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  35.82 
 
 
409 aa  201  1.9999999999999998e-50  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
409 aa  200  3e-50  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_008726  Mvan_4200  acyl-CoA dehydrogenase domain-containing protein  31.74 
 
 
432 aa  200  3e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4641  Acyl-CoA dehydrogenase-like  34 
 
 
421 aa  200  3e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33210  acyl-CoA dehydrogenase  36.03 
 
 
389 aa  200  3e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.243663  normal  0.754036 
 
 
-
 
NC_009921  Franean1_0098  acyl-CoA dehydrogenase domain-containing protein  31.41 
 
 
433 aa  200  3e-50  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0848  acyl-CoA dehydrogenase domain protein  32.68 
 
 
421 aa  200  3e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2921  acyl-CoA dehydrogenase domain protein  35.38 
 
 
403 aa  200  3.9999999999999996e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.296233 
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  35.05 
 
 
411 aa  200  3.9999999999999996e-50  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
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