| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1004 |
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| Symbol | |
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| ID | 5710520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1037708 |
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| End bp | 1038925 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641266915 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001532347 |
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| Protein GI | 159043553 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.211368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG AGCTGCCGGT CGAGGTGGAG GCGCTGCGCG CGCGCGTGGC GGATTTCGTG
GCGGGCGAGA TCCTGCCGCT GGAGGCGGAT CGCGCCAATT TCGACGCCCA TGACAACATC
GCCTTGCCGG TGCTGGAGAC CGTGCGCGCC AAGGCGAAGG CCGCAGGGCT CTGGGCGCCG
CAATCGCCCC GCGCGCGGGG CGGCATGGGG CTGAGCACGG TCGCCCGCGC GGTGTTCTAC
GAGGAGGCGA ACCGCTCGAT CTTTGGCCCG GTATGCTTCA ACTGCGCGGC CCCGGATGAT
GGCAACATGG CGGTGCTGGC CCAGCTTGGC ACGCCCGCGC AGCAGGACCG CTGGCTGCAA
CCGATCATCG ACGGGCGCGT GCGCTCGGCC TTTGCGATGA CCGAGCCCCA TCCGGGCGGC
GGGTCCGATC CGGGCATGAT GCGGACCCGC GCCGAAAAAC GCGGCGACGG GTACGTGGTC
CACGGGCACA AGTGGTACAT CACCGGGGCG GCGGAGGCGC AGCATTTCAT CCTGCTGGCG
CGGACATCGG ACGACCCCAA ACGCGGCCAC ACGGCGTTTC TGTTCGACGC GGACCAGCCC
GGCTGGCGGA TCGACCGGCG GATCCCGATC ATGGGCCCCG AGGAGCATGG CGGCCATTGC
GAGCTGATCT TCGACGGGCT GGAGATATCG GCCGAGAACG TTCTGATGGA AGAGGGGCGC
GGGATGAAGG TCACGCAGAC CCGGCTCGGC CCCGCGCGGC TGACCCATTG CATGCGCTGG
CTGGGGCTGG CCAAGCGCTG CGTCGAGATC GCGACCGAGT ATGCGGCGAC GCGCGAGGGG
TTCGGGGTGC GGCTGGCCGA TCGCGAGAGT ATCCAGCTGA TGCTGGGCGG GCTGGCCATG
GATATCGAGG TCGGACGGCT TCTGACCATG AAGGCCGCGT GGGAGATCGA CCAGGGCGGC
TTCGCGCGCA AGGAGGTGTC CATGGCCAAG ATCCACGTGG CCAACCTGCT GCACCGCGCG
GCGGACGTGG CGATCCAGAT CAACGGGGCG CGGGGCTATT CCAGGGACAC GGTGTTGGAG
TGGATTTACC GCTATGCAAG GCAGGCGCGG CTGGTGGACG GGGCGGACGA GGTGCACCGG
ATGGTGCTGA ACCGGGTGCT GGTGGACGAG GGGCGCGATT TCTGGCGCTG GCCCGTGGCG
GACCGCGTGG CGGAATGA
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| Protein sequence | MDFELPVEVE ALRARVADFV AGEILPLEAD RANFDAHDNI ALPVLETVRA KAKAAGLWAP
QSPRARGGMG LSTVARAVFY EEANRSIFGP VCFNCAAPDD GNMAVLAQLG TPAQQDRWLQ
PIIDGRVRSA FAMTEPHPGG GSDPGMMRTR AEKRGDGYVV HGHKWYITGA AEAQHFILLA
RTSDDPKRGH TAFLFDADQP GWRIDRRIPI MGPEEHGGHC ELIFDGLEIS AENVLMEEGR
GMKVTQTRLG PARLTHCMRW LGLAKRCVEI ATEYAATREG FGVRLADRES IQLMLGGLAM
DIEVGRLLTM KAAWEIDQGG FARKEVSMAK IHVANLLHRA ADVAIQINGA RGYSRDTVLE
WIYRYARQAR LVDGADEVHR MVLNRVLVDE GRDFWRWPVA DRVAE
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