| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0183 |
|---|
| Symbol | |
|---|
| ID | 5420763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 181451 |
|---|
| End bp | 182665 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640879428 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001415099 |
|---|
| Protein GI | 154244141 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.292913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA CCATCTCCCC CGCCCTTGAG GACCTTCGGC GCCGCATCGG CGCGTTCGTG
GACCGCGAGA TCATTCCGCT GGAAGCCGAC CCTGCCGCCT ATGACGCCCA TGAGAACATC
GCGCCCGCCC CCCTGGCGCG GCTGCGGGAG AAGGCGAGGG CCGAGGGCCT CTGGAACCTC
CAGCTGAAGC CGGAGAGCGG CGGCCTCGGC GTCGGCCGAG TGGGCATGGC GGTCTGCTAC
ACTGAGATGA ACCGCTCCAT TTTCGGTCCG GTGGTGTTCA ATTCCGCCGC TCCCGACGAC
GGCAACATGA TGGTGCTGGA GGCGGTGGGC ACGCCCGAGC AGAAGGCGAA ATGGCTCGCG
CCCATCGCGT CCGGCGCCGT GCGCTCCGCC TTCGTGATGA CCGAGCCCCA TCCCGGCGGC
GGCTCCGACC CGGGCATGAT GCTGACCCGC GCCGAGAAGC AGCCGAACGG CAGCTATCGC
ATCTACGGCC GCAAATGGTT CATCACCGGC GCGGAGGAAG CCGCCCACCT CATCCTCATC
GCCCGCACCT CGGACGATCC GCGCACCGGC CTCACCGCCT TCGCCTTCCA TCGCGACGCG
CCGGGCTGGC GTATCGTGCG CCGCATCCCC ATCATGGGGC CGGAGGAACA TGGCGGGCAT
TGCGAGCTGG AGTTCGACGG CCTCGAAATC CCCCCCGAGG ATGTGCTTCT GGGCGAAGGC
AAGGGCCTGC GGGTGACCCA GATCCGCCTG GGACCTGCCC GCCTCACCCA TTGCATGCGC
TGGCTGGGCC TTGCCATGCG CTGCGTGGAG ATCGCGCGGG CGTATGCGGA CGTGCGCTAC
GGCTTCGGCG TGCGCCTCGC CGACCGTGAA AGCGTGCAGA CCCTGCTGGG CCGCATCGCC
ATGGACATCG AGATTTCCCG GCTCCTCACC ATGAAGGCGG CGTGGGAGCT GGATCGCGGC
GGGCTCGCCC GCAAGGAGGT GTCCATGGCC AAGATCAAGG CCGCCAACAC CCTGCACCTC
GCCGCCGACA GCGCCATCCA GATCAATGGG GCGCGCGGCT ATTCCAAGGA TACGGTGCTG
GAGTGGATCT ATCGCTACGC CCGCCAGGCC CGTCTGGTGG ACGGCGCGGA CGCGGTGCAC
GAGATGGTGC TGAACCGCTT CCTGGAGAAG GAAGAAGGTG CCTTCTGGAA CTGGCCGGTG
GGAGAAGGCG CATGA
|
|---|
| Protein sequence | MDFTISPALE DLRRRIGAFV DREIIPLEAD PAAYDAHENI APAPLARLRE KARAEGLWNL
QLKPESGGLG VGRVGMAVCY TEMNRSIFGP VVFNSAAPDD GNMMVLEAVG TPEQKAKWLA
PIASGAVRSA FVMTEPHPGG GSDPGMMLTR AEKQPNGSYR IYGRKWFITG AEEAAHLILI
ARTSDDPRTG LTAFAFHRDA PGWRIVRRIP IMGPEEHGGH CELEFDGLEI PPEDVLLGEG
KGLRVTQIRL GPARLTHCMR WLGLAMRCVE IARAYADVRY GFGVRLADRE SVQTLLGRIA
MDIEISRLLT MKAAWELDRG GLARKEVSMA KIKAANTLHL AADSAIQING ARGYSKDTVL
EWIYRYARQA RLVDGADAVH EMVLNRFLEK EEGAFWNWPV GEGA
|
|---|
| |