More than 300 homologs were found in PanDaTox collection
for query gene Rmar_2207 on replicon NC_013501
Organism: Rhodothermus marinus DSM 4252



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013501  Rmar_2207  acyl-CoA dehydrogenase domain protein  100 
 
 
397 aa  800    Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_014212  Mesil_2292  Butyryl-CoA dehydrogenase  64.42 
 
 
398 aa  519  1e-146  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1096  acyl-CoA dehydrogenase domain-containing protein  62.86 
 
 
397 aa  503  1e-141  Meiothermus ruber DSM 1279  Bacteria  normal  0.7199  normal  0.106826 
 
 
-
 
NC_009943  Dole_1921  acyl-CoA dehydrogenase domain-containing protein  57.25 
 
 
400 aa  449  1e-125  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1392  acyl-CoA dehydrogenase domain protein  55.04 
 
 
424 aa  430  1e-119  Spirosoma linguale DSM 74  Bacteria  normal  0.671392  normal  0.19275 
 
 
-
 
NC_007651  BTH_I2362  acyl-CoA dehydrogenase domain-containing protein  55.75 
 
 
390 aa  372  1e-102  Burkholderia thailandensis E264  Bacteria  normal  0.478003  n/a   
 
 
-
 
NC_009972  Haur_1560  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
405 aa  361  1e-98  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  47.7 
 
 
405 aa  334  1e-90  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_014165  Tbis_2518  acyl-CoA dehydrogenase domain-containing protein  49.23 
 
 
426 aa  330  2e-89  Thermobispora bispora DSM 43833  Bacteria  normal  0.0714534  normal 
 
 
-
 
NC_013441  Gbro_1690  acyl-CoA dehydrogenase domain protein  46.88 
 
 
428 aa  324  2e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  0.505537  n/a   
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  46.51 
 
 
412 aa  323  5e-87  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  44.27 
 
 
401 aa  321  1.9999999999999998e-86  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  46.87 
 
 
407 aa  317  3e-85  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_007908  Rfer_1019  acyl-CoA dehydrogenase-like  46.91 
 
 
417 aa  313  4.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.530508  n/a   
 
 
-
 
NC_013411  GYMC61_1801  acyl-CoA dehydrogenase domain protein  44.16 
 
 
403 aa  309  5.9999999999999995e-83  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_3591  acyl-CoA dehydrogenase domain-containing protein  45.78 
 
 
409 aa  306  5.0000000000000004e-82  Frankia sp. EAN1pec  Bacteria  normal  normal  0.969674 
 
 
-
 
NC_014165  Tbis_2699  acyl-CoA dehydrogenase domain-containing protein  45.25 
 
 
404 aa  304  2.0000000000000002e-81  Thermobispora bispora DSM 43833  Bacteria  normal  0.401579  normal  0.61 
 
 
-
 
NC_014158  Tpau_1860  acyl-CoA dehydrogenase domain protein  45.32 
 
 
407 aa  304  2.0000000000000002e-81  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.51043  n/a   
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  43.85 
 
 
409 aa  303  5.000000000000001e-81  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_009484  Acry_2113  acyl-CoA dehydrogenase domain-containing protein  44.73 
 
 
426 aa  302  5.000000000000001e-81  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  43.33 
 
 
409 aa  302  8.000000000000001e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_013093  Amir_3461  acyl-CoA dehydrogenase domain protein  47.04 
 
 
402 aa  302  8.000000000000001e-81  Actinosynnema mirum DSM 43827  Bacteria  normal  0.274426  n/a   
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.59 
 
 
409 aa  301  1e-80  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  44.36 
 
 
409 aa  301  1e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  46.8 
 
 
414 aa  300  2e-80  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  44.1 
 
 
409 aa  301  2e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  43.81 
 
 
414 aa  300  3e-80  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  43.81 
 
 
409 aa  300  3e-80  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  46.06 
 
 
402 aa  300  4e-80  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  43.56 
 
 
409 aa  298  8e-80  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  45.8 
 
 
398 aa  298  1e-79  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3328  acyl-CoA dehydrogenase-like  43.18 
 
 
416 aa  298  1e-79  Rhodoferax ferrireducens T118  Bacteria  normal  0.520188  n/a   
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  42.78 
 
 
409 aa  297  2e-79  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  43.56 
 
 
409 aa  297  2e-79  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4306  acyl-CoA dehydrogenase domain-containing protein  43.29 
 
 
424 aa  296  3e-79  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.530471  normal 
 
 
-
 
NC_010552  BamMC406_3221  acyl-CoA dehydrogenase domain-containing protein  46.29 
 
 
414 aa  296  3e-79  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3285  acyl-CoA dehydrogenase domain-containing protein  43.18 
 
 
424 aa  296  6e-79  Delftia acidovorans SPH-1  Bacteria  normal  0.64464  normal  0.6296 
 
 
-
 
NC_014210  Ndas_2921  acyl-CoA dehydrogenase domain protein  45.74 
 
 
403 aa  295  7e-79  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.296233 
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  44.07 
 
 
407 aa  294  2e-78  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_007347  Reut_A1002  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  42.04 
 
 
420 aa  294  2e-78  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  45.32 
 
 
403 aa  294  2e-78  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_013440  Hoch_4197  acyl-CoA dehydrogenase domain protein  43.9 
 
 
405 aa  294  2e-78  Haliangium ochraceum DSM 14365  Bacteria  normal  0.62553  normal  0.93763 
 
 
-
 
NC_013510  Tcur_2480  acyl-CoA dehydrogenase domain protein  45.34 
 
 
397 aa  293  3e-78  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00582345  n/a   
 
 
-
 
NC_013947  Snas_2907  acyl-CoA dehydrogenase domain-containing protein  44.36 
 
 
405 aa  293  4e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.227145  normal  0.172894 
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
414 aa  293  5e-78  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_007973  Rmet_0968  acyl-CoA dehydrogenase-like protein  41.94 
 
 
420 aa  293  5e-78  Cupriavidus metallidurans CH34  Bacteria  normal  0.0487857  normal  0.0424234 
 
 
-
 
NC_009719  Plav_0392  acyl-CoA dehydrogenase domain-containing protein  39.46 
 
 
405 aa  292  6e-78  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.35321  normal 
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  44.67 
 
 
403 aa  292  6e-78  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  46.39 
 
 
414 aa  292  6e-78  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
414 aa  292  6e-78  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_007925  RPC_4699  acyl-CoA dehydrogenase-like  50.3 
 
 
422 aa  292  7e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4077  acyl-CoA dehydrogenase domain-containing protein  44.92 
 
 
420 aa  291  1e-77  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2961  acyl-CoA dehydrogenase-like  42.79 
 
 
419 aa  291  1e-77  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4641  Acyl-CoA dehydrogenase-like  47.77 
 
 
421 aa  290  2e-77  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3077  acyl-CoA dehydrogenase domain-containing protein  42.78 
 
 
424 aa  290  3e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.765136  normal  0.228122 
 
 
-
 
NC_007958  RPD_0767  acyl-CoA dehydrogenase-like  47.77 
 
 
421 aa  290  3e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3969  acyl-CoA dehydrogenase domain-containing protein  44.04 
 
 
396 aa  290  3e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  0.669296  normal  0.426807 
 
 
-
 
NC_010623  Bphy_5044  acyl-CoA dehydrogenase domain-containing protein  45.99 
 
 
416 aa  290  4e-77  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2628  acyl-CoA dehydrogenase domain protein  42.46 
 
 
423 aa  290  4e-77  Variovorax paradoxus S110  Bacteria  normal  0.122301  n/a   
 
 
-
 
NC_007651  BTH_I1083  acyl-CoA dehydrogenase domain-containing protein  42.78 
 
 
408 aa  289  8e-77  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  45.88 
 
 
414 aa  288  1e-76  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_007951  Bxe_A3188  putative acyl-CoA dehydrogenase oxidoreductase  42.2 
 
 
419 aa  288  1e-76  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1953  putative acyl-CoA dehydrogenase family protein  41.48 
 
 
415 aa  288  1e-76  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.134016 
 
 
-
 
NC_008782  Ajs_1777  acyl-CoA dehydrogenase domain-containing protein  41.52 
 
 
424 aa  287  2e-76  Acidovorax sp. JS42  Bacteria  normal  0.314845  normal 
 
 
-
 
NC_010681  Bphyt_1367  acyl-CoA dehydrogenase domain protein  42.2 
 
 
419 aa  287  2e-76  Burkholderia phytofirmans PsJN  Bacteria  normal  0.44038  hitchhiker  0.00184571 
 
 
-
 
NC_011992  Dtpsy_1945  acyl-CoA dehydrogenase domain protein  41.52 
 
 
424 aa  287  2e-76  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5271  acyl-CoA dehydrogenase domain-containing protein  46.04 
 
 
414 aa  287  2e-76  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.166824  normal 
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  45.94 
 
 
400 aa  286  5e-76  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_011004  Rpal_0848  acyl-CoA dehydrogenase domain protein  47.5 
 
 
421 aa  286  5.999999999999999e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3689  acyl-CoA dehydrogenase-like  44.76 
 
 
424 aa  286  7e-76  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2399  acyl-CoA dehydrogenase-like  45.36 
 
 
412 aa  285  9e-76  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.137171  n/a   
 
 
-
 
NC_013159  Svir_16760  acyl-CoA dehydrogenase  45.01 
 
 
402 aa  285  1.0000000000000001e-75  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1987  acyl-CoA dehydrogenase domain-containing protein  41.69 
 
 
412 aa  285  1.0000000000000001e-75  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A0715  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  284  2.0000000000000002e-75  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1153  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  284  2.0000000000000002e-75  Burkholderia mallei SAVP1  Bacteria  normal  0.0557082  n/a   
 
 
-
 
NC_009080  BMA10247_0436  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  284  2.0000000000000002e-75  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1806  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  284  2.0000000000000002e-75  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0379201  n/a   
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  43.61 
 
 
407 aa  283  4.0000000000000003e-75  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_009076  BURPS1106A_1322  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  283  5.000000000000001e-75  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1459  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  283  5.000000000000001e-75  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1313  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
408 aa  283  5.000000000000001e-75  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2069  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
403 aa  282  6.000000000000001e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4008  acyl-CoA dehydrogenase domain protein  42.97 
 
 
402 aa  282  8.000000000000001e-75  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2866  acyl-CoA dehydrogenase domain-containing protein  43.73 
 
 
401 aa  281  1e-74  Thermobispora bispora DSM 43833  Bacteria  normal  0.511671  normal 
 
 
-
 
NC_007969  Pcryo_1185  acyl-CoA dehydrogenase-like  40.2 
 
 
422 aa  281  1e-74  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.0669565 
 
 
-
 
NC_009092  Shew_2860  acyl-CoA dehydrogenase domain-containing protein  42.13 
 
 
432 aa  280  3e-74  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1812  acyl-CoA dehydrogenase-like  41.19 
 
 
408 aa  280  3e-74  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1911  acyl-CoA dehydrogenase domain-containing protein  42.04 
 
 
419 aa  280  3e-74  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.117323  normal 
 
 
-
 
NC_013131  Caci_1151  acyl-CoA dehydrogenase domain protein  42.75 
 
 
402 aa  279  6e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.73028  normal 
 
 
-
 
NC_008705  Mkms_3808  acyl-CoA dehydrogenase domain-containing protein  43.66 
 
 
433 aa  278  9e-74  Mycobacterium sp. KMS  Bacteria  normal  0.670394  normal  0.124585 
 
 
-
 
NC_008146  Mmcs_3735  acyl-CoA dehydrogenase-like protein  43.66 
 
 
433 aa  278  9e-74  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2511  acyl-CoA dehydrogenase-like  40.76 
 
 
408 aa  277  2e-73  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3747  acyl-CoA dehydrogenase domain-containing protein  43.66 
 
 
433 aa  277  2e-73  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4978  acyl-CoA dehydrogenase domain protein  47.19 
 
 
403 aa  277  3e-73  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6158  acyl-CoA dehydrogenase domain protein  42.53 
 
 
410 aa  277  3e-73  Variovorax paradoxus S110  Bacteria  normal  0.870392  n/a   
 
 
-
 
NC_011138  MADE_01061  putative acyl-CoA dehydrogenase  39.04 
 
 
411 aa  276  5e-73  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2205  acyl-CoA dehydrogenase domain-containing protein  40.05 
 
 
403 aa  275  8e-73  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2451  acyl-CoA dehydrogenase domain-containing protein  43.34 
 
 
432 aa  273  3e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  43.96 
 
 
411 aa  273  4.0000000000000004e-72  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4413  acyl-CoA dehydrogenase domain protein  43.17 
 
 
416 aa  273  4.0000000000000004e-72  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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