| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31580 |
|---|
| Symbol | |
|---|
| ID | 4381454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2744407 |
|---|
| End bp | 2745636 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325118 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_790687 |
|---|
| Protein GI | 116050494 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00724554 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG CCTATTCCCC CAAGGTCCAG GAGCTGCGTG AACGTGTCAG CGCGTTCATG
GAAGCGCATG TCTATCCCGC CGAGGCCGTG TTCGAGCGCC AGGTCGCCGA GGGCGACCGC
TGGCAGCCGA CGGCGATCAT GGAAGAGCTG AAGGCCAAGG CCAAGGCCGA AGGGCTGTGG
AACCTGTTCC TGCCCGAGTC CGAGTATGGT GCCGGGCTGG CCAACCACGA ATACGCGCCG
CTGGCGGAAA TCATGGGCCG TTCGCTGATC GGGCCGGAAC CCTTCAACTG CGCCGCGCCG
GATACCGGCA ACATGGAGGT GCTGGTGCGC TACGGCAGCG AGGAGCAGAA GCGCACCTGG
CTGGAACCGC TGCTGAGCGG CGAGATCCGC TCGGCCTTCG CCATGACCGA ACCGGGCGTG
GCCTCGTCCG ACGCCACCAA TATGGAGGCG CGCGCCGAGC GCCAGGGCAA CGACTGGGTG
ATCAACGGGC GCAAGTGGTG GACTTCCGGC GCCTGCGATC CGCGCTGCAA GATCCTGATC
TTCATGGGCC TGACCAACCC GGACGCGCCG CGCCACCAGC AGCACTCGAT GATCCTGGTA
CCGGTCGACA CCCCCGGGGT GAAGATCCTC CGTCCGCTGC CGGTGTTCGG CTACGACGAC
GCGCCGCATG GCCATGCCGA AGTGCTGTTC GAGAACGTGC GGGTGCCCTA CGAGAACGTC
ATCCTCGGCG AGGGCCGCGG TTTCGAGATC GCCCAGGGGC GCCTCGGCCC GGGCCGCATC
CACCACTGCA TGCGCTCCAT CGGCATGGCC GAGCGCGCCC TCGAACTGAT GTGCAAGCGC
GCGGTCAGCC GTACCGCGTT CGGCAAGCCG CTGGCGCGCC TGGGCGGCAA CATCGACCAC
ATCGCCGACT CGCGGATGGA GATCAACATG GCACGCCTGC TGACCCTGCA GGCCGCCTAC
ATGATGGATA CCGTGGGCAA CAAGATCGCC CAGAGCGAAA TCGCCCAGAT CAAGGTGGTG
GCGCCCAACG TGGCGTTGAA GGTGATCGAC CGGGCGATCC AGATGCACGG TGGCGCCGGG
GTTTCCAACG ACTTCCCGCT GGCCTACTGG TACGCCATGC AGCGCACCCT GCGCCTGGCC
GACGGTCCGG ACGAGGTGCA CCGCGCGGCG ATCGGCAAGT TCGAGCTGGG CAAGTACGTG
CCCAGGGAGA TGCTGCGCAG CAGCCGCTGA
|
|---|
| Protein sequence | MDFAYSPKVQ ELRERVSAFM EAHVYPAEAV FERQVAEGDR WQPTAIMEEL KAKAKAEGLW
NLFLPESEYG AGLANHEYAP LAEIMGRSLI GPEPFNCAAP DTGNMEVLVR YGSEEQKRTW
LEPLLSGEIR SAFAMTEPGV ASSDATNMEA RAERQGNDWV INGRKWWTSG ACDPRCKILI
FMGLTNPDAP RHQQHSMILV PVDTPGVKIL RPLPVFGYDD APHGHAEVLF ENVRVPYENV
ILGEGRGFEI AQGRLGPGRI HHCMRSIGMA ERALELMCKR AVSRTAFGKP LARLGGNIDH
IADSRMEINM ARLLTLQAAY MMDTVGNKIA QSEIAQIKVV APNVALKVID RAIQMHGGAG
VSNDFPLAYW YAMQRTLRLA DGPDEVHRAA IGKFELGKYV PREMLRSSR
|
|---|
| |