Gene Mjls_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0088 
Symbol 
ID4875834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp94965 
End bp96266 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content68% 
IMG OID640137402 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001068392 
Protein GI126432701 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.403775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTC GGGCTCTCGG TCACCGACAG TGGCCCGGCG GACCGTCTGC GTGGGCATCG 
TCATATCGTG ACGGCATGGA CTTCGCGATG TCGGCCAAGG CGCTCGACTA CCACCAGCGG
CTCACCGATT TCATGGTCGA GCACGTCTTC CCCGCCGAGG CGGACTACCA CCGTTACCGC
GAGGAGGCCG GACCGAAGGA CCACACGGTC CCGCCGGTCG TCGAGGACCT CAAGAAGCTG
GCCAAGGAAC GCGGCCTGTG GAACCTATTC CTGCCGTCGG AATCCGGGTT GTCCAACCTG
GAGTACGCGG AACTGGCCGA ACTGTCCGGG TGGAGCATGG AGATCGCCCC CGAGGTGATC
AACTGTGCCG CCCCCGACAC CGGCAACATG GAGACCCTGC ACCTCTTCGC CAACGATGAG
CAGCGCAAGC AGTGGCTCGA CCCGCTGCTG AACGGCGAGA TCCGCAGCGC GTTCGCGATG
ACCGAACCGG CCGTCGCCTC CTCCGACGCC CGCAACATCG AGACGACGAT GCTGCGTGAC
GGATCCGACT ACGTGATCAA CGGCCGCAAG TGGTGGATCA CCGGCGCGGC CGATCCGCGC
TGCAAGCTCC TCATCGTGAT GGGCCGCACC AACCCGGATG CGGCCAGCCA TCAGCAGCAG
TCGATGATCC TGGTGCCCGC CGACACCCCC GGCGTCGACA TCCAGCGGTC GCTTCCCGTG
TTCGGCTGGC AGGACCAGCA CGGCCACTGC GAGATCGTGT TCGACAACGT CCGCGTGCCC
GTCGAGAACC TGCTGCACGA AGAGGGCAGC GGTTTCGCGA TCGCCCAGGC CCGGCTCGGC
CCGGGCCGCA TCCACCACTG CATGCGGGCC CTCGGTGCCG CCGAGCGGGC GCTGGCGCTG
ATGATCGACC GCGTCCAGAA GCGGGTGGCC TTCGGCAAGC CGCTGGCCGA ACAGGGTGTG
GTGCGCGAGG CGATTGCCAA GTCCCGCAAC GAGATCGACA TGGCCCGGCT GCTGTGCCAC
AAGGCGGCGT GGACCATCGA CCAGGAGGGC AACAAGGCCG CGCACGTGCT GGTGTCGCAG
ATCAAGTCGG TGGCCCCGCA GGTCGCCTGC GACGTCATCG ACCGCGCGAT CCAGGTGCAC
GGTGGGGCCG GGGTGTCCGA CGACTTCCCG CTGGCCCGGC TCTACGCGTG GCACCGCGCG
ATGCGGCTGT TCGACGGCCC CGACGAGGTG CACATGCGGA CCATCGCGCG CGCCGAACTG
GGCCGCGAGA AGTCCCCGTT CGCAGCCGCG GTGTGCCGCT AG
 
Protein sequence
MERRALGHRQ WPGGPSAWAS SYRDGMDFAM SAKALDYHQR LTDFMVEHVF PAEADYHRYR 
EEAGPKDHTV PPVVEDLKKL AKERGLWNLF LPSESGLSNL EYAELAELSG WSMEIAPEVI
NCAAPDTGNM ETLHLFANDE QRKQWLDPLL NGEIRSAFAM TEPAVASSDA RNIETTMLRD
GSDYVINGRK WWITGAADPR CKLLIVMGRT NPDAASHQQQ SMILVPADTP GVDIQRSLPV
FGWQDQHGHC EIVFDNVRVP VENLLHEEGS GFAIAQARLG PGRIHHCMRA LGAAERALAL
MIDRVQKRVA FGKPLAEQGV VREAIAKSRN EIDMARLLCH KAAWTIDQEG NKAAHVLVSQ
IKSVAPQVAC DVIDRAIQVH GGAGVSDDFP LARLYAWHRA MRLFDGPDEV HMRTIARAEL
GREKSPFAAA VCR