| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1392 |
|---|
| Symbol | |
|---|
| ID | 8725126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1692186 |
|---|
| End bp | 1693460 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003386241 |
|---|
| Protein GI | 284036311 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.671392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.19275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA TATTCACTAC CGAGCGAGTC AGGCCGTTGC TGGCCCAGGT TCGCCAGTTT
GTCGAAACGG AGCTTATCCC ACTCGAAGAC GGCTTTTCGC ACCAGAACAT CAGGGCTATT
TTGCCCATTC TCGATCAGAA ACGGCAGCAG GTTAAGGACG CTGGCCTGTG GGGTCTGCAC
TTGTCGGTTG CCGAAGGGGG ACATGGTCTG ACACTCTGCG AATTCGGGCA AATCAGCGAA
GCCCTGGCCC ATGCGCCGTT TTTCGGACAT TACGTCTTTG GCTGCCAGGC ACCCGATATT
GGCAATACGG AACTGCTACA CAAATTTGCC TCCGCCGAAC TAAAAGAGCG CTATCTGAAG
CCATTGATGT CGGGCGAAAT CCGTTCGTGC TTTTCCATGA CCGAGCCCGA ATTCGCGGGG
TCGAACCCCA CGCGTATGGC TACGCTTGCT GTGCGGGAAG GGGATGAGTA CGTTATCAAC
GGGCGGAAAT GGTTTACCTC TTCGGCCGAC GGAGCCGCCT TTGCGGTGGT GATGGCTGTA
ACCAATCCCG ATGCCGCTCC ACACCAGCGT GCCAGCATGA TCATCGTCCC GACGGATACA
CCGGGGTTCA ACATTGAGCG GAACATTCCG GTGTTTGGTG AAGCGGGCGA AGGCTGGTTT
AGTCACGCCG AAGTGACCTA CTCAAACTGC CGGGTGCCGG TCGCGAACGT CATTGCGGGC
GAAGGGATGG GGTTTCGACT GGCGCAGGAA CGGCTGGGGC CGGGTCGGGT ACACCATTGC
ATGCGCTGGA TTGGCAATGC GGAGAAAGCG CTGGACCTCC TGTGCAAACG GGCTGCTACC
CGCGAGATCG AAGACGGCGT GATGCTTGGC GAAAAGCAGT TCATTCAGGA CTTTATTGCC
CAAAGCCGGG CCGAAATAGA CGCCAGCCGT TTGTACGTAC TAAACACGGC GCACATGATC
GACACGGTGG GGGTGAGTAA CGTCCGGGAT GCCGTGTCGG CCATTAAGTT CTACGTGGCA
AATGCGTTTC TGCGGGTACT CGACCGGGCC ATTCAGGTAC ACGGTGCTCT GGGCGTTACG
GACGACACCG TGCTGTCGGC GATGTATCGG CACGAGCGCG GTGCCCGTAT CTGGGACGGA
GCCGATGAAG TGCATAAGCA AAATCTGGCC ATCAATATTC TCAAAACCTA TGGTCTGGAT
ATTAAAAAGA AAGCCCGTGA ACTACGTCAG TTTCGTCAAC TGATGGAAGC AGAGCGAATG
ATGAATGCAG AATGA
|
|---|
| Protein sequence | METIFTTERV RPLLAQVRQF VETELIPLED GFSHQNIRAI LPILDQKRQQ VKDAGLWGLH
LSVAEGGHGL TLCEFGQISE ALAHAPFFGH YVFGCQAPDI GNTELLHKFA SAELKERYLK
PLMSGEIRSC FSMTEPEFAG SNPTRMATLA VREGDEYVIN GRKWFTSSAD GAAFAVVMAV
TNPDAAPHQR ASMIIVPTDT PGFNIERNIP VFGEAGEGWF SHAEVTYSNC RVPVANVIAG
EGMGFRLAQE RLGPGRVHHC MRWIGNAEKA LDLLCKRAAT REIEDGVMLG EKQFIQDFIA
QSRAEIDASR LYVLNTAHMI DTVGVSNVRD AVSAIKFYVA NAFLRVLDRA IQVHGALGVT
DDTVLSAMYR HERGARIWDG ADEVHKQNLA INILKTYGLD IKKKARELRQ FRQLMEAERM
MNAE
|
|---|
| |