Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0013 |
Symbol | |
ID | 5052181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 12512 |
End bp | 13759 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470155 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001154799 |
Protein GI | 145588202 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCCTTATT CAAAGATTAT TTTAGCGAAA GGAATTTATA AATGTCATTT CACATTTAGC TACTATTACA ATCAAATCAT GGATTTCTCC TTAACGCCCA AACTAGAAGC GCTGCGGGAT CGTACGCGAG CATTCATTCT CGAACAAGTT ATTCCGCTCG AAAAAGATCC ACGACAAAAT GAGCATGGAC CATCCGAAGA GTTGCGCAAA GATCTCATCG AGCTTGCCCG TAAAGAGGGC CTACTAACAC CACACGCTTC AATTGAGATG GGCGGCCTAG GATTAAGCCA CGTAGAGAAA GCAGTAATCT TTGAAGAGGC TGGCTACTCC TGTTTGGGTC CAATAGCCAT GAATATTCAC GCACCCGATG AGGGGAATAT TCATTTGATG GAAGAGGTTG CTACTCCTGA GCAGAAAGAG CGTTGGCTAA AGCCACTAGC TCAGGGAAAA ATTCGTTCTT GCTTTGCAAT GACAGAACCA GCCCCCGGAG CAGGTTCAGA CCCCTCCATG CTGGCAACTA CCGCAATCAA AGACGGTGAC GACTATCTCA TCAATGGACG CAAGTGGTTT ATCACTGGGG CCGAAGGGGC AGATTTCGTA ATTATCATGG CGCTCGGTGA AGACGGCACT GCCACTATGT TTCTCTCTGA TATGAATGTG CCTGGAATAG AGCTTGTTCG CAATATGGAC GCAATGGACA GTTGCTTTAC TGGCGGACAT GGAGTTTTGC AGTTTACGAA TTTGCGCGTT CCAGCTAAAA ATATCTTAGG TGAGTTTGGT AAAGGATTTA AATATGCTCA GGTGCGTTTG GCGCCAGCCC GACTGACACA CTGCATGCGC TGGCTTGGGC AAGCGCGCCG AGCTCAAGAT ATAGCAATTG CCTACGCACA ACAAAGAGAA GCTTTTGGGA AAATTTTAGG CGCACATGAA GGCGTAGGCT TCATGTTGGC AGATAACGAT ATGGATCTAC AAACATCCAG ACTACATATA TTGCAAACTG CTTGGCTGTT AGACCAAGGC CAGCGCTGCA ATTATGAATC GAGTCGTGCC AAGGTTGTTT GTTCTGAAGC TGAGTGGCGC GTAGTAGATC GCTGTGTACA AATTTTAGGT GGCCAGGGTG TTACCGGTGA AACAGCGTTG ATGAAAATAT TCAAAGATAT GCGGGGCTTC CGCATCTATG ATGGCCCAAG CGAAGTACAT CGCTGGAGTA TGGCTCGCAA ACTTATTGGA AACAAAGAAT CTAAGTGA
|
Protein sequence | MPYSKIILAK GIYKCHFTFS YYYNQIMDFS LTPKLEALRD RTRAFILEQV IPLEKDPRQN EHGPSEELRK DLIELARKEG LLTPHASIEM GGLGLSHVEK AVIFEEAGYS CLGPIAMNIH APDEGNIHLM EEVATPEQKE RWLKPLAQGK IRSCFAMTEP APGAGSDPSM LATTAIKDGD DYLINGRKWF ITGAEGADFV IIMALGEDGT ATMFLSDMNV PGIELVRNMD AMDSCFTGGH GVLQFTNLRV PAKNILGEFG KGFKYAQVRL APARLTHCMR WLGQARRAQD IAIAYAQQRE AFGKILGAHE GVGFMLADND MDLQTSRLHI LQTAWLLDQG QRCNYESSRA KVVCSEAEWR VVDRCVQILG GQGVTGETAL MKIFKDMRGF RIYDGPSEVH RWSMARKLIG NKESK
|
| |