| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5752 |
|---|
| Symbol | |
|---|
| ID | 8669046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6299983 |
|---|
| End bp | 6301266 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_003341243 |
|---|
| Protein GI | 271967047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.596158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGGACT TCTCCACAGA GCCGGAGTTC CAGAAGAAGC TCGACTGGAT GGACGTCTTC
ATCCGTGAGG AGGTCGAACC GCTCGACCTC GTCTTCGGCG GCCACGCCTA CCGGGACATG
GACGACAGGC TGCGCGGGAT CGTCGAGCCG CTCAAGCGGC AGGTCAGGGA CCAGGGCCTG
TGGGCCTGCC ATCTGGGCCC GGAGCTGGGC GGTCAGGGAT ACGGGCAGCT CAAGCTGGCG
CTGATGAACG AGCTCATCGG CCGGTCCGGC TGGGCGCCGG TCATCTTCGG CTGCCAGGCC
CCCGACACCG GCAACGCGGA GATCATCGCG ATGTACGGCA CCGCCGAGCA GAAGGAGCGC
TACCTCCAGC CGCTGCTGAA CGGCGAGTGC TTCTCCGCCT ACTCGATGAC GGAGCCGCAC
GCGGGCGCCG ACCCGCGCCT GTTCCGCTGC CGCGCGGTAC GGGACGCCTC CGGCGACTGG
GTCATCAGCG GCGAGAAGTA CTTCACCTCC AACGCCTCCT CGGCGACCTT CCTGATCGTG
ATGGCGGTGA CCGACCCCGA GGCCCACCCC TACAAGCGGA TGTCGATGTT CCTCGTGCCG
TCGGACACGC CCGGCGTCGA GATCCTGCGG AACATCGGCA CGATAGGCGA GCGGCCCGGC
CACGGCGCGC ACGCCCACAT CCGCTACGAC GACGTCCGCG TCCCGCCGGA GGCGCTGCTC
GGCGAGGAGG GCGGCGCCTT CGCCGTCTCC CAGGCCCGTC TGGGCGGCGG GCGCATCCAC
CACTCGATGC GCACGGTGGC GGCGGTGAAG AAGGCCTTCG ACATGATGTG CGAGCGGGTG
CTCTCCAGGC AGACGCACGA CGGGTTGCTG GCCGACAAGC AGATGGTGCA GGCCGCGATC
GCCGACTCCT ACATCCAGAT CCAGCAGTTC CGGCTGATGA TCCTGCACAC CGCGTGGCTG
ATCGACCAGT CCTCGACCAG GGAGGCCCGC ACGCAGATCG CGGCCTGCAA GGTCGCCGCG
GCCCGGGTCT TCCACGATGT CGTCTACCGC GCGATGCACA TCCACGGCGC GCTCGGCGTC
TCCAACGAGA CGCCGCTCGC CAGGCTCTGG CAGAGCGCGC CGCTGATGGG CATCATGGAC
GGCCCCACCG AGGTGCACCT GGCCTCCATC TCCCGGCGGG TGCTGCGCGG CTACTCCCCG
GCCGAGGGGC CGTGGCCGAC CGAGTTCCTG CCCGACAGGA TCGCCGCCGC GCGGGCCAAG
TACGGGCTCT CCGAGAGAGG GTGA
|
|---|
| Protein sequence | MWDFSTEPEF QKKLDWMDVF IREEVEPLDL VFGGHAYRDM DDRLRGIVEP LKRQVRDQGL
WACHLGPELG GQGYGQLKLA LMNELIGRSG WAPVIFGCQA PDTGNAEIIA MYGTAEQKER
YLQPLLNGEC FSAYSMTEPH AGADPRLFRC RAVRDASGDW VISGEKYFTS NASSATFLIV
MAVTDPEAHP YKRMSMFLVP SDTPGVEILR NIGTIGERPG HGAHAHIRYD DVRVPPEALL
GEEGGAFAVS QARLGGGRIH HSMRTVAAVK KAFDMMCERV LSRQTHDGLL ADKQMVQAAI
ADSYIQIQQF RLMILHTAWL IDQSSTREAR TQIAACKVAA ARVFHDVVYR AMHIHGALGV
SNETPLARLW QSAPLMGIMD GPTEVHLASI SRRVLRGYSP AEGPWPTEFL PDRIAAARAK
YGLSERG
|
|---|
| |