Gene Mvan_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0116 
Symbol 
ID4648048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp127920 
End bp129263 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content67% 
IMG OID639803627 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_950973 
Protein GI120401144 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTCA CGGTTTACAC GTGTCATATC GTGGCGGTCA TGGACTTCTC GATGTCAGCC 
AAGGCGCAGG ACTATCACGA CCGGTTGACC GACTTCATGA CCGAGTCCGT GTTCCCCGCC
GAGGAGTCGT ACCACGCCTA CCGGGCAGAG GCCGGCCCGG ACGATCACAC CGTGCCGCCG
GTGGTCGAGG AGCTCAAGAA GCTGGCAAAG GCGCGCGGGC TGTGGAACCT GTTCCTGCCC
TCGGAGTCGG GCCTGTCAAA CCTCGAGTAT GCACCGCTGG CAGAGCTCAC CGGCTGGAGC
ATGGAGATCG CGCCCGAGGC CACCAACTGC GCCGCCCCCG ACACCGGCAA CATGGAGACG
CTGCACCTGT TCGCCACCGA GGAGCAGCGC AAGCAATGGC TCGAGCCGCT GTTGGCCGGT
GAGATCCGCA GCGCGTTCGC GATGACCGAG CCGGCCGTGG CGTCGAGCGA CGCGCGCAAC
ATCGAGACCA CCATGCTGCG TGACGGCGAC GACTACGTCA TCAACGGCCG CAAGTGGTGG
ATCACCGGCG CCGCGGACCC GCGCTGCAAG ATCCTGATCG TCATGGGCCG TACCAATCCC
GACGGGCCCA GCCACCGACA GCAGTCGATG ATCCTGGTCC CGGCCGACAC CCCGGGTGTG
GACATCCAGC GCTCGCTTCC GGTGTTCGGC TGGCAGGACC AGCACGGCCA CTGCGAGATC
GTGTTCGACA ACGTGCGGGT GCCCGCATCG AACCTGCTCG ACGAGGAAGG GTCCGGCTTT
GCGATCGCCC AGGCCCGCCT CGGACCGGGC CGCATCCACC ACTGCATGCG GGCGATCGGC
GCGGCCGAGC GGGCGCTGGC GCTGATGATC GACCGCGTGC AGACCCGTAT CGCCTTCGGC
AAGCCGCTGG CCGAACAGGG TGTGGTGCGT GAGGCAATAG CCAAGTCGCG CAATGAGATC
GAGCAGACCC GTCTGTTGTG CCACAAGGCG GCCTGGACCA TCGACCAGCA GGGCAACAAG
AGCAAGGATG CCCAGCTACT GGTCGCCCAG ATCAAGGCCG TGGCACCGCA GATGGCGTGC
GACGTGATCG ACCGCGCCAT CCAGGTGCAC GGTGGCGCCG GGGTGTGTGA CGACTTCCCG
CTGGCCCGGC TGTACAGCTG GCACCGTGCG ATGCGGCTGT TCGACGGTCC GGACGAGGTG
CACATGCGCA CGATCGCGCG CGCCGAGCTG GGTAGGGAGA AGTCCGCGAT GGCGACGGCG
GCGAGCCGCC AATCGGACAC GGCGGCGAGC CGCCAATCGA ATCCGGCGGC GAGCCGCCAA
TCGGAGACGG CGGTGACCGG CTAG
 
Protein sequence
MDLTVYTCHI VAVMDFSMSA KAQDYHDRLT DFMTESVFPA EESYHAYRAE AGPDDHTVPP 
VVEELKKLAK ARGLWNLFLP SESGLSNLEY APLAELTGWS MEIAPEATNC AAPDTGNMET
LHLFATEEQR KQWLEPLLAG EIRSAFAMTE PAVASSDARN IETTMLRDGD DYVINGRKWW
ITGAADPRCK ILIVMGRTNP DGPSHRQQSM ILVPADTPGV DIQRSLPVFG WQDQHGHCEI
VFDNVRVPAS NLLDEEGSGF AIAQARLGPG RIHHCMRAIG AAERALALMI DRVQTRIAFG
KPLAEQGVVR EAIAKSRNEI EQTRLLCHKA AWTIDQQGNK SKDAQLLVAQ IKAVAPQMAC
DVIDRAIQVH GGAGVCDDFP LARLYSWHRA MRLFDGPDEV HMRTIARAEL GREKSAMATA
ASRQSDTAAS RQSNPAASRQ SETAVTG