More than 300 homologs were found in PanDaTox collection
for query gene RPB_4641 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0848  acyl-CoA dehydrogenase domain protein  90.69 
 
 
421 aa  790    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4641  Acyl-CoA dehydrogenase-like  100 
 
 
421 aa  864    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4699  acyl-CoA dehydrogenase-like  84.76 
 
 
422 aa  746    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0767  acyl-CoA dehydrogenase-like  92.16 
 
 
421 aa  810    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4077  acyl-CoA dehydrogenase domain-containing protein  69.3 
 
 
420 aa  615  1e-175  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1019  acyl-CoA dehydrogenase-like  68.92 
 
 
417 aa  612  9.999999999999999e-175  Rhodoferax ferrireducens T118  Bacteria  normal  0.530508  n/a   
 
 
-
 
NC_007908  Rfer_3689  acyl-CoA dehydrogenase-like  65.95 
 
 
424 aa  586  1e-166  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5044  acyl-CoA dehydrogenase domain-containing protein  60.96 
 
 
416 aa  528  1e-149  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4335  acyl-CoA dehydrogenase domain-containing protein  61.39 
 
 
414 aa  521  1e-147  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0735838  normal  0.987341 
 
 
-
 
NC_008391  Bamb_5081  acyl-CoA dehydrogenase domain-containing protein  63.09 
 
 
414 aa  523  1e-147  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3035  Acyl-CoA dehydrogenase  60.43 
 
 
414 aa  518  1e-146  Burkholderia sp. 383  Bacteria  normal  0.0562026  normal  0.845573 
 
 
-
 
NC_010086  Bmul_5271  acyl-CoA dehydrogenase domain-containing protein  61.15 
 
 
414 aa  521  1e-146  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.166824  normal 
 
 
-
 
NC_008061  Bcen_5016  acyl-CoA dehydrogenase-like  61.15 
 
 
414 aa  520  1e-146  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.605306  n/a   
 
 
-
 
NC_010552  BamMC406_3221  acyl-CoA dehydrogenase domain-containing protein  63.32 
 
 
414 aa  521  1e-146  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5844  acyl-CoA dehydrogenase domain-containing protein  61.15 
 
 
414 aa  520  1e-146  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0983385  normal 
 
 
-
 
NC_013205  Aaci_0158  acyl-CoA dehydrogenase domain protein  54.55 
 
 
405 aa  438  9.999999999999999e-123  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.00409231  n/a   
 
 
-
 
NC_008010  Dgeo_2399  acyl-CoA dehydrogenase-like  54.7 
 
 
412 aa  422  1e-117  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.137171  n/a   
 
 
-
 
NC_002947  PP_2437  acyl-CoA dehydrogenase domain-containing protein  52.84 
 
 
414 aa  420  1e-116  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3258  acyl-CoA dehydrogenase domain-containing protein  52.84 
 
 
409 aa  419  1e-116  Pseudomonas putida F1  Bacteria  normal  normal  0.384897 
 
 
-
 
NC_010322  PputGB1_2082  acyl-CoA dehydrogenase domain-containing protein  52.59 
 
 
409 aa  419  1e-116  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0925  acyl-CoA dehydrogenase domain protein  52.49 
 
 
401 aa  419  1e-116  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2474  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  53.33 
 
 
409 aa  417  9.999999999999999e-116  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.159264  normal  0.108403 
 
 
-
 
NC_013510  Tcur_2090  acyl-CoA dehydrogenase domain protein  52.09 
 
 
407 aa  416  9.999999999999999e-116  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0739056  n/a   
 
 
-
 
NC_013510  Tcur_4020  acyl-CoA dehydrogenase domain protein  52.45 
 
 
402 aa  417  9.999999999999999e-116  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00340941  n/a   
 
 
-
 
NC_010501  PputW619_3063  acyl-CoA dehydrogenase domain-containing protein  50.94 
 
 
409 aa  418  9.999999999999999e-116  Pseudomonas putida W619  Bacteria  normal  0.0887975  normal 
 
 
-
 
NC_008148  Rxyl_2418  acyl-CoA dehydrogenase-like protein  53.04 
 
 
412 aa  416  9.999999999999999e-116  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.185617  n/a   
 
 
-
 
NC_007492  Pfl01_3651  Acyl-CoA dehydrogenase-like  51.36 
 
 
409 aa  412  1e-114  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0710553 
 
 
-
 
NC_014165  Tbis_2866  acyl-CoA dehydrogenase domain-containing protein  53.03 
 
 
401 aa  414  1e-114  Thermobispora bispora DSM 43833  Bacteria  normal  0.511671  normal 
 
 
-
 
NC_004578  PSPTO_2745  acyl-CoA dehydrogenase family protein  51.12 
 
 
409 aa  408  1e-113  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0107  acyl-CoA dehydrogenase domain-containing protein  54.66 
 
 
433 aa  409  1e-113  Mycobacterium sp. KMS  Bacteria  normal  normal  0.363073 
 
 
-
 
NC_007908  Rfer_3328  acyl-CoA dehydrogenase-like  51.58 
 
 
416 aa  410  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.520188  n/a   
 
 
-
 
NC_009077  Mjls_0088  acyl-CoA dehydrogenase domain-containing protein  54.66 
 
 
433 aa  409  1e-113  Mycobacterium sp. JLS  Bacteria  normal  normal  0.403775 
 
 
-
 
NC_008146  Mmcs_0098  acyl-CoA dehydrogenase-like protein  54.66 
 
 
433 aa  409  1e-113  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0734  acyl-CoA dehydrogenase domain-containing protein  53.17 
 
 
418 aa  409  1e-113  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.998726  normal 
 
 
-
 
NC_008825  Mpe_A1953  putative acyl-CoA dehydrogenase family protein  50.96 
 
 
415 aa  411  1e-113  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.134016 
 
 
-
 
NC_009092  Shew_2860  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
432 aa  405  1.0000000000000001e-112  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1801  acyl-CoA dehydrogenase domain protein  52.36 
 
 
403 aa  406  1.0000000000000001e-112  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_0116  acyl-CoA dehydrogenase domain-containing protein  53.17 
 
 
447 aa  406  1.0000000000000001e-112  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3077  acyl-CoA dehydrogenase domain-containing protein  51.57 
 
 
424 aa  405  1.0000000000000001e-112  Acidovorax citrulli AAC00-1  Bacteria  normal  0.765136  normal  0.228122 
 
 
-
 
NC_008463  PA14_31580  putative acyl-CoA dehydrogenase  50.87 
 
 
409 aa  405  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00724554 
 
 
-
 
NC_008782  Ajs_1777  acyl-CoA dehydrogenase domain-containing protein  51.46 
 
 
424 aa  402  1e-111  Acidovorax sp. JS42  Bacteria  normal  0.314845  normal 
 
 
-
 
NC_009921  Franean1_3591  acyl-CoA dehydrogenase domain-containing protein  52.46 
 
 
409 aa  404  1e-111  Frankia sp. EAN1pec  Bacteria  normal  normal  0.969674 
 
 
-
 
NC_013595  Sros_1435  acyl-CoA dehydrogenase family protein  54.81 
 
 
400 aa  404  1e-111  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00297714  normal  0.111309 
 
 
-
 
NC_013739  Cwoe_4575  acyl-CoA dehydrogenase domain protein  51.62 
 
 
407 aa  403  1e-111  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.879339 
 
 
-
 
NC_009439  Pmen_2439  acyl-CoA dehydrogenase domain-containing protein  50.37 
 
 
409 aa  404  1e-111  Pseudomonas mendocina ymp  Bacteria  normal  0.987595  normal 
 
 
-
 
NC_009565  TBFG_10155  acyl-CoA dehydrogenase fadE2  53.85 
 
 
403 aa  404  1e-111  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1945  acyl-CoA dehydrogenase domain protein  51.46 
 
 
424 aa  404  1e-111  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2686  putative acyl-CoA dehydrogenase  50.87 
 
 
409 aa  404  1e-111  Pseudomonas aeruginosa PA7  Bacteria  normal  0.136892  n/a   
 
 
-
 
NC_013947  Snas_2907  acyl-CoA dehydrogenase domain-containing protein  52.13 
 
 
405 aa  404  1e-111  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.227145  normal  0.172894 
 
 
-
 
NC_014165  Tbis_2699  acyl-CoA dehydrogenase domain-containing protein  53.48 
 
 
404 aa  399  9.999999999999999e-111  Thermobispora bispora DSM 43833  Bacteria  normal  0.401579  normal  0.61 
 
 
-
 
NC_013739  Cwoe_4008  acyl-CoA dehydrogenase domain protein  51.61 
 
 
402 aa  400  9.999999999999999e-111  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_4197  acyl-CoA dehydrogenase domain protein  52.75 
 
 
405 aa  400  9.999999999999999e-111  Haliangium ochraceum DSM 14365  Bacteria  normal  0.62553  normal  0.93763 
 
 
-
 
NC_013131  Caci_1151  acyl-CoA dehydrogenase domain protein  51.84 
 
 
402 aa  400  9.999999999999999e-111  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.73028  normal 
 
 
-
 
NC_008345  Sfri_2069  acyl-CoA dehydrogenase domain-containing protein  49.38 
 
 
403 aa  401  9.999999999999999e-111  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1987  acyl-CoA dehydrogenase domain-containing protein  50.86 
 
 
412 aa  398  1e-109  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2485  acyl-CoA dehydrogenase  52.49 
 
 
398 aa  397  1e-109  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1083  acyl-CoA dehydrogenase domain-containing protein  50.99 
 
 
408 aa  395  1e-109  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0968  acyl-CoA dehydrogenase-like protein  50.12 
 
 
420 aa  397  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  0.0487857  normal  0.0424234 
 
 
-
 
NC_007347  Reut_A1002  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.88 
 
 
420 aa  394  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2628  acyl-CoA dehydrogenase domain protein  49.04 
 
 
423 aa  392  1e-108  Variovorax paradoxus S110  Bacteria  normal  0.122301  n/a   
 
 
-
 
NC_008699  Noca_3866  acyl-CoA dehydrogenase domain-containing protein  50.97 
 
 
407 aa  394  1e-108  Nocardioides sp. JS614  Bacteria  normal  0.196465  n/a   
 
 
-
 
NC_008786  Veis_4306  acyl-CoA dehydrogenase domain-containing protein  50.35 
 
 
424 aa  391  1e-107  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.530471  normal 
 
 
-
 
NC_006348  BMA1806  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
408 aa  388  1e-107  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0379201  n/a   
 
 
-
 
NC_008836  BMA10229_A0715  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
408 aa  388  1e-107  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0436  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
408 aa  388  1e-107  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2511  acyl-CoA dehydrogenase-like  48.79 
 
 
408 aa  389  1e-107  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1153  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
408 aa  388  1e-107  Burkholderia mallei SAVP1  Bacteria  normal  0.0557082  n/a   
 
 
-
 
NC_007951  Bxe_A3188  putative acyl-CoA dehydrogenase oxidoreductase  48.77 
 
 
419 aa  390  1e-107  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1511  acyl-CoA dehydrogenase domain-containing protein  51.6 
 
 
403 aa  390  1e-107  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000569336 
 
 
-
 
NC_010681  Bphyt_1367  acyl-CoA dehydrogenase domain protein  49.26 
 
 
419 aa  390  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  0.44038  hitchhiker  0.00184571 
 
 
-
 
NC_014158  Tpau_1860  acyl-CoA dehydrogenase domain protein  49.88 
 
 
407 aa  390  1e-107  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.51043  n/a   
 
 
-
 
NC_011894  Mnod_4413  acyl-CoA dehydrogenase domain protein  49.63 
 
 
416 aa  387  1e-106  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3285  acyl-CoA dehydrogenase domain-containing protein  49.4 
 
 
424 aa  387  1e-106  Delftia acidovorans SPH-1  Bacteria  normal  0.64464  normal  0.6296 
 
 
-
 
NC_007434  BURPS1710b_1459  acyl-CoA dehydrogenase domain-containing protein  50.49 
 
 
408 aa  386  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1322  acyl-CoA dehydrogenase domain-containing protein  50.49 
 
 
408 aa  386  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1812  acyl-CoA dehydrogenase-like  49.51 
 
 
408 aa  387  1e-106  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1313  acyl-CoA dehydrogenase domain-containing protein  50.49 
 
 
408 aa  386  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0646  acyl-CoA dehydrogenase domain-containing protein  48.15 
 
 
412 aa  387  1e-106  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1911  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
419 aa  384  1e-105  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.117323  normal 
 
 
-
 
NC_007948  Bpro_2961  acyl-CoA dehydrogenase-like  48.91 
 
 
419 aa  384  1e-105  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4071  acyl-CoA dehydrogenase domain-containing protein  49.03 
 
 
435 aa  385  1e-105  Caulobacter sp. K31  Bacteria  normal  0.796967  normal 
 
 
-
 
NC_013595  Sros_7782  acyl-CoA dehydrogenase domain-containing protein  52.48 
 
 
401 aa  383  1e-105  Streptosporangium roseum DSM 43021  Bacteria  normal  0.711164  normal 
 
 
-
 
NC_008699  Noca_1832  acyl-CoA dehydrogenase domain-containing protein  50.85 
 
 
411 aa  382  1e-105  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3710  acyl-CoA dehydrogenase domain protein  49.26 
 
 
410 aa  381  1e-104  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1854  acyl-CoA dehydrogenase domain protein  49.14 
 
 
419 aa  381  1e-104  Ralstonia pickettii 12D  Bacteria  normal  0.505719  normal  0.0689875 
 
 
-
 
NC_010682  Rpic_2177  acyl-CoA dehydrogenase domain protein  49.14 
 
 
419 aa  379  1e-104  Ralstonia pickettii 12J  Bacteria  normal  0.556942  normal  0.0164112 
 
 
-
 
NC_003295  RSc2020  acyl-CoA dehydrogenase oxidoreductase protein  49.63 
 
 
420 aa  380  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  0.245052  normal  0.152176 
 
 
-
 
NC_012792  Vapar_6158  acyl-CoA dehydrogenase domain protein  49.39 
 
 
410 aa  381  1e-104  Variovorax paradoxus S110  Bacteria  normal  0.870392  n/a   
 
 
-
 
NC_007778  RPB_2260  Acyl-CoA dehydrogenase-like  49.01 
 
 
410 aa  379  1e-104  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.716497  normal 
 
 
-
 
NC_013757  Gobs_4978  acyl-CoA dehydrogenase domain protein  50.24 
 
 
403 aa  378  1e-104  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01061  putative acyl-CoA dehydrogenase  47.19 
 
 
411 aa  378  1e-103  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3408  acyl-CoA dehydrogenase domain-containing protein  49.39 
 
 
416 aa  377  1e-103  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.288256 
 
 
-
 
NC_007958  RPD_3210  acyl-CoA dehydrogenase-like  48.28 
 
 
412 aa  375  1e-103  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1562  acyl-CoA dehydrogenase domain-containing protein  49.63 
 
 
403 aa  374  1e-102  Salinispora tropica CNB-440  Bacteria  normal  normal  0.469679 
 
 
-
 
NC_013093  Amir_3461  acyl-CoA dehydrogenase domain protein  50.49 
 
 
402 aa  374  1e-102  Actinosynnema mirum DSM 43827  Bacteria  normal  0.274426  n/a   
 
 
-
 
NC_014210  Ndas_2921  acyl-CoA dehydrogenase domain protein  51.11 
 
 
403 aa  374  1e-102  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.296233 
 
 
-
 
NC_007925  RPC_3482  acyl-CoA dehydrogenase-like  48.52 
 
 
412 aa  368  1e-101  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.468948  normal 
 
 
-
 
NC_009484  Acry_2113  acyl-CoA dehydrogenase domain-containing protein  48.88 
 
 
426 aa  370  1e-101  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16760  acyl-CoA dehydrogenase  51.49 
 
 
402 aa  366  1e-100  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1247  acyl-CoA dehydrogenase domain protein  48.1 
 
 
416 aa  364  1e-99  Gordonia bronchialis DSM 43247  Bacteria  normal  0.820001  n/a   
 
 
-
 
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