Gene Amir_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3461 
Symbol 
ID8327651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4023942 
End bp4025150 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content72% 
IMG OID644943962 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003101202 
Protein GI256377542 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.274426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCG CCCACGACGC CACCACCGAG CAGCTGCGGC GGGAGCTGCT GGAGTTCATG 
GAGGACTTCG TGCTGCCCGC GGAGCCGGTG CTGGCGCGGC AGCTGGCCGA GGCGGACCCG
TGGGTCAAGC CGGAGGTGAT CGAGGAGCTC AAGGCCGAGG CGCGGCGGCG GGGTTTGTGG
AACCTGTTCC TGCCCGACCG GGAGCACGGG GCGGGGCTGA CGAACCTGCA GTACGCGCCG
CTGGCGGAGA TCACCGGCCG CAGCCCGCAC CTGGCGCCGG AGGCGCTCAA CTGCGCGGCG
CCGGACACCG GGAACATGGA GGTGCTGGCG ATGTTCGGCA GCGCCGGGCA GCAGCGGGAG
TGGCTCAGGC CGCTGCTGGA CGGGCGCATC CGGTCGGCGT TCTGCATGAC CGAGCCGGAG
GTGGCGTCCT CGGACGCGAC GAACATCGCC ACGCGGATCA GGCGCGAGGG CGACGAGTAC
GTGATCGACG GGCGCAAGTG GTGGTCGTCG GGGGCGATGA ACCCCGAGTG CGCGATCTTC
ATCGTGATGG GCAAGACCGA CCCGGACGCG GAGCGGCACC GGCAGCAGTC GATGATCCTG
GTGCCGCGTG AGACGCCCGG TGTGCGGGTG GAGCGCGGGA TGCGGGTGTT CGGCTACGAC
GACGCCTCGC ACGGCGGGCA CGCCGAGGTG GTGTTCGAGG GCGTGCGGGT GCCCGCGTCG
AACCTGATCG GCGGGGAGGG CGACGGGTTC GCGATCGCCC AGGCCAGGCT CGGGCCGGGG
CGGGTGCACC ACTGCATGCG GCTGATCGGG ATGGCCGAGC GGGCGCTGGA GCTGATGTGC
AGGCGCGCGC TGGAGCGGGT GGCGTTCGGC AGGCCGCTGG CCGAGCAGGG CGTGGTGCGG
GAGTGGATCG CGGAGTCGCG GGTGCGCATC GAGCAGGCGC GGCTGCTGGT GCTCAAGACG
GCGTGGCTGA TGGACACGGT GGGCAACAAG GGCGCGCACA CGGAGATCCA GGCGATCAAG
ATCGCGGTGC CGCTGATGGC GGAGTGGGTG CTGGACAAGG CGATCCAGGC GCACGGCGCG
GCCGGGGTGA GCCAGGACCA CCCGCTGGCG GAGCTGTGGG CGTCGGCGCG CACGCTGCGG
CTGGCGGACG GGCCGGACGA GGTGCACCGG GTGTCGTTGG CGAAGCGGGA GTTGAAGCGG
TACGCGTGA
 
Protein sequence
MDFAHDATTE QLRRELLEFM EDFVLPAEPV LARQLAEADP WVKPEVIEEL KAEARRRGLW 
NLFLPDREHG AGLTNLQYAP LAEITGRSPH LAPEALNCAA PDTGNMEVLA MFGSAGQQRE
WLRPLLDGRI RSAFCMTEPE VASSDATNIA TRIRREGDEY VIDGRKWWSS GAMNPECAIF
IVMGKTDPDA ERHRQQSMIL VPRETPGVRV ERGMRVFGYD DASHGGHAEV VFEGVRVPAS
NLIGGEGDGF AIAQARLGPG RVHHCMRLIG MAERALELMC RRALERVAFG RPLAEQGVVR
EWIAESRVRI EQARLLVLKT AWLMDTVGNK GAHTEIQAIK IAVPLMAEWV LDKAIQAHGA
AGVSQDHPLA ELWASARTLR LADGPDEVHR VSLAKRELKR YA