Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3461 |
Symbol | |
ID | 8327651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4023942 |
End bp | 4025150 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644943962 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003101202 |
Protein GI | 256377542 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.274426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTCG CCCACGACGC CACCACCGAG CAGCTGCGGC GGGAGCTGCT GGAGTTCATG GAGGACTTCG TGCTGCCCGC GGAGCCGGTG CTGGCGCGGC AGCTGGCCGA GGCGGACCCG TGGGTCAAGC CGGAGGTGAT CGAGGAGCTC AAGGCCGAGG CGCGGCGGCG GGGTTTGTGG AACCTGTTCC TGCCCGACCG GGAGCACGGG GCGGGGCTGA CGAACCTGCA GTACGCGCCG CTGGCGGAGA TCACCGGCCG CAGCCCGCAC CTGGCGCCGG AGGCGCTCAA CTGCGCGGCG CCGGACACCG GGAACATGGA GGTGCTGGCG ATGTTCGGCA GCGCCGGGCA GCAGCGGGAG TGGCTCAGGC CGCTGCTGGA CGGGCGCATC CGGTCGGCGT TCTGCATGAC CGAGCCGGAG GTGGCGTCCT CGGACGCGAC GAACATCGCC ACGCGGATCA GGCGCGAGGG CGACGAGTAC GTGATCGACG GGCGCAAGTG GTGGTCGTCG GGGGCGATGA ACCCCGAGTG CGCGATCTTC ATCGTGATGG GCAAGACCGA CCCGGACGCG GAGCGGCACC GGCAGCAGTC GATGATCCTG GTGCCGCGTG AGACGCCCGG TGTGCGGGTG GAGCGCGGGA TGCGGGTGTT CGGCTACGAC GACGCCTCGC ACGGCGGGCA CGCCGAGGTG GTGTTCGAGG GCGTGCGGGT GCCCGCGTCG AACCTGATCG GCGGGGAGGG CGACGGGTTC GCGATCGCCC AGGCCAGGCT CGGGCCGGGG CGGGTGCACC ACTGCATGCG GCTGATCGGG ATGGCCGAGC GGGCGCTGGA GCTGATGTGC AGGCGCGCGC TGGAGCGGGT GGCGTTCGGC AGGCCGCTGG CCGAGCAGGG CGTGGTGCGG GAGTGGATCG CGGAGTCGCG GGTGCGCATC GAGCAGGCGC GGCTGCTGGT GCTCAAGACG GCGTGGCTGA TGGACACGGT GGGCAACAAG GGCGCGCACA CGGAGATCCA GGCGATCAAG ATCGCGGTGC CGCTGATGGC GGAGTGGGTG CTGGACAAGG CGATCCAGGC GCACGGCGCG GCCGGGGTGA GCCAGGACCA CCCGCTGGCG GAGCTGTGGG CGTCGGCGCG CACGCTGCGG CTGGCGGACG GGCCGGACGA GGTGCACCGG GTGTCGTTGG CGAAGCGGGA GTTGAAGCGG TACGCGTGA
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Protein sequence | MDFAHDATTE QLRRELLEFM EDFVLPAEPV LARQLAEADP WVKPEVIEEL KAEARRRGLW NLFLPDREHG AGLTNLQYAP LAEITGRSPH LAPEALNCAA PDTGNMEVLA MFGSAGQQRE WLRPLLDGRI RSAFCMTEPE VASSDATNIA TRIRREGDEY VIDGRKWWSS GAMNPECAIF IVMGKTDPDA ERHRQQSMIL VPRETPGVRV ERGMRVFGYD DASHGGHAEV VFEGVRVPAS NLIGGEGDGF AIAQARLGPG RVHHCMRLIG MAERALELMC RRALERVAFG RPLAEQGVVR EWIAESRVRI EQARLLVLKT AWLMDTVGNK GAHTEIQAIK IAVPLMAEWV LDKAIQAHGA AGVSQDHPLA ELWASARTLR LADGPDEVHR VSLAKRELKR YA
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