| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2860 |
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| Symbol | |
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| ID | 4922239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3391405 |
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| End bp | 3392703 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164457 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001094985 |
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| Protein GI | 127513788 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTCG GTCAGTTACA GCTAAAGGAA TCTACCATGA ACTTCGAATT CTCACCCAAA
GTACAAGCGC TGCGCGAACG TCTGCTGGCC TTCATGGATG AGCACATCTA CCCCAACGAA
TCCCTGTGGG AACAACAGGT CGAAGAAGGC GATCGCTGGG AGTCACCGGC TATCCTGGCC
GAGCTGAAGG CCAAGGCCAA AGACGCCGGC CTGTGGAACC TCTTCCTGCC CCAAGTCTAC
GGCGAGTTCA GCCCAGGCCT GACTAACCTT GAATATGCGC CCCTGGCGGA GATCATGGGC
CGGGTCTACT GGGCCTCGGA GGTCTTTAAC TGCAGCGCGC CGGACACGGG CAACATGGAG
GTACTGGCCC GCTATGGGAA CAAAGAGCAA CAGGAACGCT GGTTGCAGCC CCTGCTAAAT
GGCGAGATCC GCTCGGCCTT CTCCATGACT GAACCCGATG TCGCCTCCTC AGATGCCACC
AACGTCGAGA CCTCCATCGT CCGCGACGGC GACGAGTATG TGATCAACGG CCGCAAGTGG
TATATCTCAG GCGCCTGTAA CAATCACACC CAGATCCATA TCGTGATGGG CAAGACAGAC
CCCGATAACA GCAACAAATA CATTCAGCAG TCTATGATAC TTGTGCCGGC CAACACTCCA
GGGGTCAAGG TCGTACGCCC CATGAAGGTA TTTGGCTATG ACGATGCCCC CGAGGGCCAT
GCAGAGGTGA TTTACGACAA TGTCCGCGTG CCGGTAAGCA ACATGCTGCT GGGTGAAGGA
CGCGGCTTCG AAATCGCCCA GGGGCGCCTC GGCCCCGGCC GTATTCACCA CTGCATGCGC
ACCGTGGGCC TGGCCCAGCG CGCGCTGGAG CAGATGTGTG AGCGGGCCGA GACCCGCATC
GCCTTCGGCA AGCCGCTGAG CAAGCAACAA TCTGTGCGTG AAGCCATCGC CAAGTCGGCC
TGCGAGGTCG AGCAGGCACG CCTGCTGACC CTCAAGGCCG CAGCCAAAAT GGACCAGGGC
GGCAACAAGG CCGCGAAAGA TCTGATCGCC ATGATCAAGA TTGTCGCCCC CAACATGGGC
TGCGCCGTCA TCGACCGCGC CATTCAGCTC CACGGCGGCG GTGGTCTGAG CCAGGACTTC
TTCCTGGCCA AGGCCTACAC GATAACCCGC TCCATCCGTC TGGCGGACGG CCCGGATCAG
GTGCATATGA TGCAGCTGGG TCGCAACCTG GCCCGCGACG TTCACGCCCA AAACCTGGCT
GCCCAACATC CAGCAAAACC TGTGGGAGCC GTATCATGA
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| Protein sequence | MGFGQLQLKE STMNFEFSPK VQALRERLLA FMDEHIYPNE SLWEQQVEEG DRWESPAILA
ELKAKAKDAG LWNLFLPQVY GEFSPGLTNL EYAPLAEIMG RVYWASEVFN CSAPDTGNME
VLARYGNKEQ QERWLQPLLN GEIRSAFSMT EPDVASSDAT NVETSIVRDG DEYVINGRKW
YISGACNNHT QIHIVMGKTD PDNSNKYIQQ SMILVPANTP GVKVVRPMKV FGYDDAPEGH
AEVIYDNVRV PVSNMLLGEG RGFEIAQGRL GPGRIHHCMR TVGLAQRALE QMCERAETRI
AFGKPLSKQQ SVREAIAKSA CEVEQARLLT LKAAAKMDQG GNKAAKDLIA MIKIVAPNMG
CAVIDRAIQL HGGGGLSQDF FLAKAYTITR SIRLADGPDQ VHMMQLGRNL ARDVHAQNLA
AQHPAKPVGA VS
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