| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4306 |
|---|
| Symbol | |
|---|
| ID | 4694831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4749278 |
|---|
| End bp | 4750552 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639852051 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_999027 |
|---|
| Protein GI | 121611220 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.530471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG AATACTCCCC CAAGACCAAG GAACTGCAGG CCCGACTGCT GCGCTTCATG
GACGAGCACA TCTACCCGGC CGAGACCGCC TACAGCGCCG AACTGGCCGC CAACACCGCC
GCAGGCAAGC GCTGGTCGGC CCTGGCCACC ATCGAGAACC TCAAACCCAA GGCCCGGGCC
GCCGGCCTGT GGAACCTGTT CCTGCCGGTC GATAGCGCTG CCGCATCGGG CTACGACGGC
GCCGGCCTGA CCAACCAGGA ATACGCCCCG CTGGCTGAAA TCATGGGCCG CGTGCCCTGG
GCCAGCGAGG TGTTCAACTG CTCGGCCCCG GACACGGGCA ATATGGAAAC CATTGCGCGC
TACGGCGACG AGGCCAACAA GGCGCGCTGG CTCGTGCCCC TGCTGGAAGG CCGGATCCGC
TCTGCATTTG CGATGACCGA GCCCGAAGTG GCCTCCAGCG ATGCCACCAA TATCGCCACC
CGCATCGAGC GCCAGGGCGA CGAGTACGTG ATCAACGGCC ACAAGTGGTG GATCTCCGGC
GCCGCCGACC CACGCTGCGC GGTGTTCGTG ACCATGGGCA AGACCGACCC CGAAGCGCCC
CGGCATTCGC AGCAGAGCAT GGTGCTGGTG CCGGCCGACA GCCAGGGCAT CACCATCGTG
CGCCCTTTGA ACGTGATGGG CTACGACGAC GCCCCCCACG GCCATGTCGA GATGACCTTC
GAGAACGTGC GCGTGCCCGT CTCCAGCATC CTGCTCGGCG AGGGCCGTGG CTTCGAGATC
GCCCAAGGCC GCCTGGGCCC TGGCCGCATC CACCACTGCA TGCGTCTGGT CGGCCTGGCC
GAGCGGGCGC TGGAACTGAT GTGCCGGCGC GCCACGGCGC GCACCGCCTT TGGCAAGACC
GTGGCACAGC AGACCGTCAC TCAGGAGCGC ATTGCCGAAG CCCGCTGCAA GATCGACATG
GCCCGTCTGC TCACGCTCAA GGCCGCTTGG CTGATGGATA TGGCAGGCAA CAAGGTCGCC
AAGACCGACA TCGCGATGAT CAAGGTGGTG GCACCCGGCA TGGCCTGCCA GGTCATCGAC
TGGGCCATGC AGGTGCATGG CGGCGGCGGC ATGTGCGATG ACTTCCCGCT GGCCCACGCC
TACGCCCATG CCCGCACCCT GCGCTTTGCC GATGGCCCGG ACGAGGTGCA CCGCAATGCG
ATCGCCAAGT GGGAATTGGG CAAGTACGGC AGCTATGGCC GTGATGCCGC AGTGCCGGTG
ACGCGCGGCA GTTGA
|
|---|
| Protein sequence | MDFEYSPKTK ELQARLLRFM DEHIYPAETA YSAELAANTA AGKRWSALAT IENLKPKARA
AGLWNLFLPV DSAAASGYDG AGLTNQEYAP LAEIMGRVPW ASEVFNCSAP DTGNMETIAR
YGDEANKARW LVPLLEGRIR SAFAMTEPEV ASSDATNIAT RIERQGDEYV INGHKWWISG
AADPRCAVFV TMGKTDPEAP RHSQQSMVLV PADSQGITIV RPLNVMGYDD APHGHVEMTF
ENVRVPVSSI LLGEGRGFEI AQGRLGPGRI HHCMRLVGLA ERALELMCRR ATARTAFGKT
VAQQTVTQER IAEARCKIDM ARLLTLKAAW LMDMAGNKVA KTDIAMIKVV APGMACQVID
WAMQVHGGGG MCDDFPLAHA YAHARTLRFA DGPDEVHRNA IAKWELGKYG SYGRDAAVPV
TRGS
|
|---|
| |