Gene Snas_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2907 
Symbol 
ID8884106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3058667 
End bp3059884 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_003511675 
Protein GI291300397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.227145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.172894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC TGTTCGCGGT GTCCGACCGC GCCAAGGCGT ATCAGGAAGA CCTGCGGGAG 
TTCATGACCT CCCACATCTA TCCGGCCGAG CCCGTCTACG ACCGGCAGAT GCGCGAATCG
GGTGACCCGC ACTTCCAGCC GCCGGTGCTG GAGGAGCTGA AGGCCGAGGC CAAGAAGCGC
GGACTGTGGA ACCTGTTCCA CCCCCACCCC GAATGGGGCC CCGGACTGAC CAATCTGGAG
TACGCGCCGC TGGCGGAGAT CATGGGCCGC AGCTTCATCG CCCCCGAAGC CTGCAACTGC
AACGCCCCCG ACACCGGCAA CATCGAGGTC CTGACGCTGT TCGGCACCCC CGAACACCAC
CGGCTGTACC TGAAGCCACT GCTGGACGGC ACCATGGCCT CCGCCTTCGC CATGACCGAA
CCCGACGTGG CCAGTTCCGA CGCCACCAAC ATCGAACTGC GGATGGAACG CGACGGCGAC
GACTACGTCC TCAACGGACG CAAGTGGTTC GCCTCCAACG CCCTGCACAA GAACTGCCGG
GTGCTGATCG TGATGGGAAA GACCGACCCC ACCGCGGCAC CGCACCGGCA ACAGTCCATG
GTGGTGGTTC CGATCGACGC TCCCGGCATC ACCGTGGTCC GCAACCTGCC CGTGTTCGGC
TACCTGGACC GGGAAGGACA CGCCGAGCTC ACCTTCGACA ACGTCCGGGT CCCGGCGTCC
GACATGCTCA AAGGGGAAGG CGAGGGCTTC GCCATCAGCC AGGCCAGGCT GGGGCCCGGC
CGCGTCCACC ACTGCATGCG CACCATCGGC ATGGCCGAGC GCGCGCTGGA ACTGTTGTGC
ACCAGGGCCC TGTCCCGCTC GACCTTCGGC AAGCCGTTGA GCACCCGCGC CAACATCCAG
GACTGGATCG CCGAGGCCCG CATCGAGATC GACATGGCCC GGCTGCTGAC CCTCAAGACC
GCGTACCTCA TGGACACCAT GGGCAACCAG GCCGCCGCCA CCGAGATCTC CGCGATCAAG
GTCGCCGCAC CGCAGGCCGC GCTGAACGTC ATCGACCGCG CGATCCAGGT GCACGGCGGC
GCCGGGGTCA CCGACGACTT CCCGCTGGCG ATGGCCTGGG CCCACCTGCG GGCGCTGCGA
CTGGCCGACG GCCCCGACGA AGTGCACAAA CGCGCGATCG CCCGACGGGA ACTGCGCAAA
TACGACGTGG AGGACTGA
 
Protein sequence
MAELFAVSDR AKAYQEDLRE FMTSHIYPAE PVYDRQMRES GDPHFQPPVL EELKAEAKKR 
GLWNLFHPHP EWGPGLTNLE YAPLAEIMGR SFIAPEACNC NAPDTGNIEV LTLFGTPEHH
RLYLKPLLDG TMASAFAMTE PDVASSDATN IELRMERDGD DYVLNGRKWF ASNALHKNCR
VLIVMGKTDP TAAPHRQQSM VVVPIDAPGI TVVRNLPVFG YLDREGHAEL TFDNVRVPAS
DMLKGEGEGF AISQARLGPG RVHHCMRTIG MAERALELLC TRALSRSTFG KPLSTRANIQ
DWIAEARIEI DMARLLTLKT AYLMDTMGNQ AAATEISAIK VAAPQAALNV IDRAIQVHGG
AGVTDDFPLA MAWAHLRALR LADGPDEVHK RAIARRELRK YDVED