| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3258 |
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| Symbol | |
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| ID | 5190985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3666145 |
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| End bp | 3667374 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587705 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001268568 |
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| Protein GI | 148548466 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.384897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTCG CCTATTCGCC CAAGGTCCAG GCACTGCGCG AGCGTGTCAC TGCGTTCATG
GACGCTCATG TCTACCCCGC CGAAGCCGTG TTCGAGCGCC AGGTCGCCGA GGGTGACCGC
TGGCAGCCCA CTGCAATCAT GGAGGCGCTC AAGGCCAAGG CCCGCGCCGA AGGGTTGTGG
AACCTGTTCC TGCCAGAGTC GGAATACGGC GCCGGCCTGA GCAACCTGGA GTACGCCCCG
CTGGCAGAGA TCATGGGCCG CTCGTTGCTC GGGCCGGAGC CGTTCAACTG CTCGGCGCCG
GACACTGGCA ACATGGAAGT GCTGGTGCGC TACGGCAGCG AGGCGCAAAA ACGCCAGTGG
CTGGAGCCGC TGCTGCGTGG CGAGATCCGC TCGGCGTTTG CCATGACCGA ACCGGACGTG
GCCTCCTCGG ACGCCACCAA CATGGCTGCT ACCGCCATAC GGGACGGTGA CGAGTGGGTG
ATCAACGGCC GCAAGTGGTG GACTTCCGGC GCCTGCGACC CGCGCTGCAA GGTCATGATC
TTCATGGGCC TGTCTGACCC TGAAGGGCCA CGCCACCAGC AGCATTCCAT GGTGCTGGTG
CCGACCGACA CGCCAGGCGT GAAGATCGTC CGCCCGCTGC CGGTATTCGG TTATGACGAT
GCGCCCCATG GTCATGCCGA AGTCCTTTTC GATCATGTGC GGGTGCCGTA CGAAAACGTG
ATCCTTGGCG AAGGCCGCGG CTTCGAAATT GCCCAGGGCC GCCTGGGCCC AGGCCGTATC
CACCACTGCA TGCGCTCGAT CGGCATGGCC GAGCGCGCAC TGGAGCTGAT GTGCAAGCGC
TCGGTGGAGC GTACTGCTTT CGGTCGGCCA CTGGCACGCC TGGGCGGCAA CGTCGACAAG
ATCGCCGACT CGCGCATGGA AATCGACATG GCCCGGCTGC TGACGCTCAA AGCGGCCTAC
ATGATGGACA CCGTCGGCAA CAAGGTGGCC CGTAGCGAGA TCGCCCAGAT CAAGGTGGTG
GCGCCGAACG TGGCCTTGAA GGTGATCGAC CGGGCTATCC AGATACATGG CGGGGCAGGG
GTAAGCGGCG ATTTCCCGCT GGCCTACATG TATGCCATGC AGCGCACCCT GCGCCTGGCT
GACGGGCCGG ATGAAGTGCA CAGGGCGGCG ATTGGCAAAT ACGAGATTGG CAAGTATGTG
CCGGTGGAGA TGTTGCGTAG CGGGCGGTGA
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| Protein sequence | MDFAYSPKVQ ALRERVTAFM DAHVYPAEAV FERQVAEGDR WQPTAIMEAL KAKARAEGLW
NLFLPESEYG AGLSNLEYAP LAEIMGRSLL GPEPFNCSAP DTGNMEVLVR YGSEAQKRQW
LEPLLRGEIR SAFAMTEPDV ASSDATNMAA TAIRDGDEWV INGRKWWTSG ACDPRCKVMI
FMGLSDPEGP RHQQHSMVLV PTDTPGVKIV RPLPVFGYDD APHGHAEVLF DHVRVPYENV
ILGEGRGFEI AQGRLGPGRI HHCMRSIGMA ERALELMCKR SVERTAFGRP LARLGGNVDK
IADSRMEIDM ARLLTLKAAY MMDTVGNKVA RSEIAQIKVV APNVALKVID RAIQIHGGAG
VSGDFPLAYM YAMQRTLRLA DGPDEVHRAA IGKYEIGKYV PVEMLRSGR
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