| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3408 |
|---|
| Symbol | |
|---|
| ID | 6130558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 3782526 |
|---|
| End bp | 3783776 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641643580 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001770232 |
|---|
| Protein GI | 170741577 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.288256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA CCCTCTCCGA GCGGCAGCGG CACTGGCGCG ACCGGGTCGT CGCCTTCATG
GACGAGCACG TCCGGCCGAA CGTCCCGACC TACAAGGCCG AGATGGAGGG GTTCGGCAGC
GACCGCTGGC AGCCGGTGCC GGTGATCGAG CGCCTGAAGC CCCTCGCCCG CGCGGCCGGC
CTCTGGAACC TGTTCCTGCC GCCCTCCCCG GCGCACGACA CGCCCGAGTA TCGCGGCGCG
GGCCTCACCA ACCTCGACTA CGCGCTCTGC GCCGAGGAGA TGGGCCGCGT GCCCTGGGCC
TCCGAGGTGT TCAACTGCTC GGCGCCCGAC ACCGGCAACA TGGAGGTGCT GCACCGCTAC
GGCTCCCCGG CCCAGAAGGC GCGCTGGCTC GCGCCCCTGA TGGCGGGCGA GATCCGCTCG
GCCTTCCTGA TGACCGAGCC CGACGTCGCC TCCTCGGACG CCACCAACAT CGAGACCCGG
ATCCGCCGCG ACGGCGACCA TTACGTGCTC AGCGGGCGCA AATGGTGGTC CTCGGGCGTG
GGCGACCCGC GCTGCGCCGT CGCCATCGTG ATGGGCAAGA CCGACACCGA CGCCCCCCTG
CACCAGCAGC AATCGCAGAT CCTCGTGCCC CTCGACGCGC CCGGAATCAG GGTGGTGCGG
ATGCTGCCGG TCTTCGGCTA CGACGACGCG CCGCACGGCC ACGCCGAGGT GATCCTCGAG
GAGGTGCGGG TGCCGGCCGA GAACCTGATC CTCGGCGAGG GCCGCGGCTT CGAGATCGCG
CAGGGCCGGC TCGGGCCGGG GCGGATCCAC CATTGCATGC GCACGATCGG CGTCGCCGAG
GAGGCGCTCG CGGCGATGTG CCGGCGGCTC CTCTCGCGCG TCGCCTTCGG CAAGCGCATC
GCCGACCACT CGGTCTGGGA GCAGCGCATC GCCGAGGCCC GCATCGACAT CGAGATGACG
CGGCTGCTCT GCCTGAAGGC CGCCGACATG ATGGACAAGG TCGGCAACAA GGGCGCCAAG
CTCGAGATCG CCATGATCAA GGTCGCGGCG CCCCGCATCG CCCTCAAGGT CATCGACGAC
GCCATCCAGG CCTTCGGCGG CGCGGGCGTC AGCAGCGACG CGGGCCTCGC CTACGCCTAC
GCGCGGATCC GCACGCTGCG CCTCGCGGAC GGGCCGGACG AGGTCCACAA CCGCTCGATC
GCCCGGCTGG AGCTGGCGCA GTACGGCAAC CGCGAGCGGG CCAAGGCCTG A
|
|---|
| Protein sequence | MDFTLSERQR HWRDRVVAFM DEHVRPNVPT YKAEMEGFGS DRWQPVPVIE RLKPLARAAG
LWNLFLPPSP AHDTPEYRGA GLTNLDYALC AEEMGRVPWA SEVFNCSAPD TGNMEVLHRY
GSPAQKARWL APLMAGEIRS AFLMTEPDVA SSDATNIETR IRRDGDHYVL SGRKWWSSGV
GDPRCAVAIV MGKTDTDAPL HQQQSQILVP LDAPGIRVVR MLPVFGYDDA PHGHAEVILE
EVRVPAENLI LGEGRGFEIA QGRLGPGRIH HCMRTIGVAE EALAAMCRRL LSRVAFGKRI
ADHSVWEQRI AEARIDIEMT RLLCLKAADM MDKVGNKGAK LEIAMIKVAA PRIALKVIDD
AIQAFGGAGV SSDAGLAYAY ARIRTLRLAD GPDEVHNRSI ARLELAQYGN RERAKA
|
|---|
| |