Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3328 |
Symbol | |
ID | 3962969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3693033 |
End bp | 3694283 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918148 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_524568 |
Protein GI | 89902097 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.520188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTG ACTACTCCCC CAAGACAAAA GAACTGCAAG TCAAATTGCA GGCCTTTATG AATGACTACA TCTATCCTTC AGAGGGTGCC TGGCACGCTG AAATTGAGGC CAACACCGCA GCTGGCAAAC GCTGGACACC GCTGGAACTC ATCGAGGGGC TGAAACAAAA AGCCCAGGCG GCTGGCCTGT GGAACCTGTT TTTGCCGGTC GACAGTGCTG CCGCCTCGGG CTACCAGGGC GCCGGCCTGA CCAATCAGGA ATACGCGCCG CTGGCCGAAA TCATGGGCCG CGTCCTGTGG AGCAGTGAGG TGTTCAACTG CTCGGCCCCG GATACCGGGA ACATGGAAAC CATCGCCCGT TATGGCTCCG AGGAAAACAA GGCGCGCTGG CTCAAGCCCT TGCTGGAAGG CAAGATTCGC TCCGCCTTTG CCATGACCGA GCCTGAGGTC GCATCGAGTG ACGCCACCAA CATCCAGACC CGCATGGAGC GCCAGGGCGA TGACTACGTG ATCAATGGTC GCAAATGGTG GACCTCCGGC GCCGGTGACC CGCGTTGCGC CATTCACATC GTCATGGGCA AAACCAACCC GCAAGCCGAG CGTCATGCCC AGCAAAGCAT GGTGCTGGTC CCCTCCAATA CGCCCGGTGT CACGGTGGTG CGCTCGCTCA ATGTCATGGG CTACGACGAC GCACCGCACG GCCACATGGA AGTGCTGTTT GAGAACGTGC GGGTGCCAGT CAGCAACATC CTGCTCGGTG AAGGCCGCGG TTTCGAAATC GCGCAGGGGC GCCTCGGCCC GGGCCGCATT CACCACTGCA TGCGCCTGAT TGGCCAGGCT GAGCGGGCAC TGGAGTTGAT GTGCAAGCGC GTCACCAGCC GGGTCGCCTT TGGCAAGCCG ATTGCCGCGC AGACCGTGAC GCAGGAGCGC ATTGCCGAAG CCCGCTGCAA GATCGATATG GCCCGTCTGC TCACCCTCAA AGCCGCCTGG ATGATGGACG TCGCCGGCAA CAAATTTGCC AAAAACGAGA TTGCCATGAT CAAGGTCGTG GCGCCGAGCA TGGCCTGCCA GGTGATCGAC TGGGCGATGC AGGCGCACGG CGGCGCCGGC ATGTGTGATG ACTTCCCGCT GGCCTACGCC TACACCAACG CCCGCACCCT GCGCTTTGCC GATGGGCCGG ACGAAGTACA CCGCAACGCC ATTGCCAAAC AGGAATTGCG TAAATACACA GCCGCGCCCA AGCCCGTTTG A
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Protein sequence | MDFDYSPKTK ELQVKLQAFM NDYIYPSEGA WHAEIEANTA AGKRWTPLEL IEGLKQKAQA AGLWNLFLPV DSAAASGYQG AGLTNQEYAP LAEIMGRVLW SSEVFNCSAP DTGNMETIAR YGSEENKARW LKPLLEGKIR SAFAMTEPEV ASSDATNIQT RMERQGDDYV INGRKWWTSG AGDPRCAIHI VMGKTNPQAE RHAQQSMVLV PSNTPGVTVV RSLNVMGYDD APHGHMEVLF ENVRVPVSNI LLGEGRGFEI AQGRLGPGRI HHCMRLIGQA ERALELMCKR VTSRVAFGKP IAAQTVTQER IAEARCKIDM ARLLTLKAAW MMDVAGNKFA KNEIAMIKVV APSMACQVID WAMQAHGGAG MCDDFPLAYA YTNARTLRFA DGPDEVHRNA IAKQELRKYT AAPKPV
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