| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1921 |
|---|
| Symbol | |
|---|
| ID | 5694761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2321973 |
|---|
| End bp | 2323175 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641264519 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001529802 |
|---|
| Protein GI | 158521932 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTG CAATTTCCGA TAAAATGCAG ACGATTCTGG AGATGATCGA CGAGTTCGTG
GAAAAGGAAC TGATTCCCAT GGAGCCTGAG TTTCTGACCC GTTCCTTTGC CGACATGGTG
CCCGCACTGA AGGAAAAGCG CAACATGGTA AAGAAGATGG AGCTGTGGGG TCCCCAGATT
CCAAAAGAGC TGGGCGGCAT GGGGCTCTCC CTGGTGGAGC ATGGCCTGGT GTCCGAATCC
CTGGGCCGCA GCCCCCTGGG CCATTACGTG TTCGGGTGCC AGGCACCGGA TGCCGGCAAC
ATCGAGATTC TCCATTTACA CGGCACCGAA GAACAGAAGG AGATGTATCT CAAACCCCTG
GCCGCGGGCG ACATCCGCAG CGCCTTTTCC ATGACCGAAG TGGACATGGC CGGTTCCAAC
CCTGTGATGC TGGAGACCAC GGCGGTCAAG GACGGAGACG ACTACGTGAT CAACGGTCAT
AAATGGTACA CCACGGCGGC GGAAGGCGCC AAATTCACCA TTGTCATGGC CGTAACCAAC
CCGGACGCGC CTTCCTATCT TCAGGCCAGC ATGATCATTG TGCCCACCGA CACCCCGGGC
TTCAACCTGG TGCGCAACCT GCCGGTGATG GGGGAAAAGG GCAGCGACTA TGCCAGCCAC
GCCGAGATTC TGTTTCAGTC CTGCCGGGTG CCGCAAAAGA ACCTGCTCGG GCCTGAAGGC
CATGGCTTTG TGATTGCCCA GGAGCGGCTG GGCCCGGGAC GGATTCATCA CTGCATGCGG
TGGCTGGGCA TCTGCAAGCG GTGCTTTGAC CTGATGTGCC GGCGGGCCAA CCAGCGCATG
ATTCTGCCGG ACGGCAGCAC TCTGGCCACC CGCCAGATTA TTCGCGAATG GGTGGCCGAT
TCCGCGGCCG AGATGCAGGC GGCCCGGCTG ATGACCCTGC ATGCGGCCTG GAAGATCGAT
AAATACGGCG CTCGCGAGGC CCGGTACGAC ATCTCCTTTA TCAAGTTCAT GGTGGCCAAC
ACCATGCTGC GGGTGATTGA TCGGGCATTA CAGGTCCACG GCGGCCTGGG CATGACCGAT
GACACGATCC TGGCCTTTTA CTACCGCCAC GAGCGGGCCG CCCGGATTTA CGACGGGGCC
GACGAGGTGC ACAAGATGTA CGTTGCCAAG CGCATTCTCA GGGACTACGA AGGAAAGAAG
TAG
|
|---|
| Protein sequence | MDFAISDKMQ TILEMIDEFV EKELIPMEPE FLTRSFADMV PALKEKRNMV KKMELWGPQI
PKELGGMGLS LVEHGLVSES LGRSPLGHYV FGCQAPDAGN IEILHLHGTE EQKEMYLKPL
AAGDIRSAFS MTEVDMAGSN PVMLETTAVK DGDDYVINGH KWYTTAAEGA KFTIVMAVTN
PDAPSYLQAS MIIVPTDTPG FNLVRNLPVM GEKGSDYASH AEILFQSCRV PQKNLLGPEG
HGFVIAQERL GPGRIHHCMR WLGICKRCFD LMCRRANQRM ILPDGSTLAT RQIIREWVAD
SAAEMQAARL MTLHAAWKID KYGAREARYD ISFIKFMVAN TMLRVIDRAL QVHGGLGMTD
DTILAFYYRH ERAARIYDGA DEVHKMYVAK RILRDYEGKK
|
|---|
| |