237 homologs were found in PanDaTox collection
for query gene Amir_0984 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_0984  eIF-2B alpha/beta/delta-related uncharacterized protein  100 
 
 
343 aa  677    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2276  eIF-2B alpha/beta/delta-related uncharacterized protein  57.27 
 
 
348 aa  361  8e-99  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3385  eIF-2B alpha/beta/delta-related uncharacterized protein  57.96 
 
 
357 aa  337  9.999999999999999e-92  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1773  eIF-2B alpha/beta/delta-related uncharacterized protein  37.69 
 
 
343 aa  212  1e-53  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0775  eIF-2B alpha/beta/delta-related uncharacterized protein  35.8 
 
 
357 aa  207  2e-52  Brachyspira murdochii DSM 12563  Bacteria  normal  0.369946  n/a   
 
 
-
 
NC_002967  TDE1667  methylthioribose-1-phosphate isomerase  35.47 
 
 
352 aa  205  1e-51  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.0000944772  n/a   
 
 
-
 
NC_008009  Acid345_1175  translation initiation factor 2B subunit I  37.1 
 
 
354 aa  185  1.0000000000000001e-45  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4869  eIF-2B alpha/beta/delta-related uncharacterized protein  38.77 
 
 
359 aa  184  2.0000000000000003e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6765  translation initiation factor, aIF-2BI family  37.91 
 
 
369 aa  171  1e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0254  aIF-2BI family translation initiation factor  35.78 
 
 
346 aa  166  5e-40  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0016  aIF-2BI family translation initiation factor  34.95 
 
 
343 aa  165  1.0000000000000001e-39  Thermotoga sp. RQ2  Bacteria  normal  0.570831  n/a   
 
 
-
 
NC_009486  Tpet_0016  aIF-2BI family translation initiation factor  34.95 
 
 
343 aa  165  1.0000000000000001e-39  Thermotoga petrophila RKU-1  Bacteria  normal  0.339634  n/a   
 
 
-
 
NC_007604  Synpcc7942_1992  translation initiation factor 2B subunit I  35.35 
 
 
348 aa  164  2.0000000000000002e-39  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.337411 
 
 
-
 
NC_013223  Dret_0503  translation initiation factor, aIF-2BI family  35.26 
 
 
350 aa  161  2e-38  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1519  aIF-2BI family translation initiation factor  32.74 
 
 
350 aa  161  2e-38  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.889993  n/a   
 
 
-
 
NC_012034  Athe_1360  translation initiation factor, aIF-2BI family  28.96 
 
 
342 aa  160  3e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0559648  n/a   
 
 
-
 
NC_009675  Anae109_4334  eIF-2B alpha/beta/delta-related uncharacterized protein  36.36 
 
 
337 aa  160  4e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1944  translation initiation factor 2B subunit I  37.21 
 
 
352 aa  158  1e-37  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00466755  normal  0.570212 
 
 
-
 
NC_011831  Cagg_3560  translation initiation factor, aIF-2BI family  35.12 
 
 
357 aa  153  4e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1491  translation initiation factor, aIF-2BI family  36.96 
 
 
353 aa  152  5.9999999999999996e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  0.626941  n/a   
 
 
-
 
NC_007908  Rfer_3749  putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase  33.92 
 
 
354 aa  150  2e-35  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_2043  methylthioribose-1-phosphate isomerase  33.23 
 
 
354 aa  150  2e-35  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0810  aIF-2BI family translation initiation factor  33.94 
 
 
349 aa  150  2e-35  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1203  translation initiation factor, aIF-2BI family  36.76 
 
 
358 aa  151  2e-35  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.178333 
 
 
-
 
NC_010513  Xfasm12_2124  methylthioribose-1-phosphate isomerase  33.64 
 
 
354 aa  150  3e-35  Xylella fastidiosa M12  Bacteria  normal  0.369854  n/a   
 
 
-
 
NC_011891  A2cp1_4339  translation initiation factor, aIF-2BI family  37 
 
 
339 aa  150  4e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4317  translation initiation factor, aIF-2BI family  37 
 
 
339 aa  150  5e-35  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1036  translation initiation factor, aIF-2BI family  35.62 
 
 
347 aa  149  7e-35  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.313313  n/a   
 
 
-
 
NC_009972  Haur_2349  aIF-2BI family translation initiation factor  33.75 
 
 
358 aa  148  1.0000000000000001e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.944221  n/a   
 
 
-
 
NC_014212  Mesil_1647  translation initiation factor, aIF-2BI family  36.39 
 
 
329 aa  148  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0929  translation initiation factor, aIF-2BI family  30.98 
 
 
344 aa  147  3e-34  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_007760  Adeh_4186  translation initiation factor 2B subunit I  35.78 
 
 
339 aa  147  3e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_0005  translation initiation factor IF-2B subunit alpha  36.23 
 
 
365 aa  147  4.0000000000000006e-34  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_009012  Cthe_0621  translation initiation factor 2B subunit I  31.08 
 
 
342 aa  146  6e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0997628  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0327  methylthioribose-1-phosphate isomerase  32.05 
 
 
348 aa  145  1e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0999  aIF-2BI family translation initiation factor  33.95 
 
 
327 aa  145  1e-33  Meiothermus ruber DSM 1279  Bacteria  normal  0.260098  normal 
 
 
-
 
NC_006274  BCZK0319  methylthioribose-1-phosphate isomerase  31.68 
 
 
347 aa  144  2e-33  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0703  translation initiation factor 2B subunit I  35.29 
 
 
351 aa  144  2e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  hitchhiker  0.000787843 
 
 
-
 
NC_013216  Dtox_1186  translation initiation factor, aIF-2BI family  36.88 
 
 
345 aa  144  2e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000144196  normal  0.031954 
 
 
-
 
NC_011772  BCG9842_B4924  methylthioribose-1-phosphate isomerase  31.87 
 
 
348 aa  144  2e-33  Bacillus cereus G9842  Bacteria  normal  0.64519  normal 
 
 
-
 
NC_009253  Dred_2064  aIF-2BI family translation initiation factor  31.23 
 
 
346 aa  144  2e-33  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000777983  n/a   
 
 
-
 
NC_011883  Ddes_2312  translation initiation factor, aIF-2BI family  35.37 
 
 
378 aa  144  2e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0332  methylthioribose-1-phosphate isomerase  31.16 
 
 
348 aa  144  3e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0379  methylthioribose-1-phosphate isomerase  31.16 
 
 
348 aa  144  3e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0347  methylthioribose-1-phosphate isomerase  31.16 
 
 
347 aa  144  3e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0639  aIF-2BI family translation initiation factor  30.06 
 
 
372 aa  144  3e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.249987  n/a   
 
 
-
 
NC_005957  BT9727_0316  methylthioribose-1-phosphate isomerase  30.86 
 
 
348 aa  143  5e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU3379  aIF-2BI family translation initiation factor  32.01 
 
 
346 aa  142  9.999999999999999e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0485  aIF-2BI family translation initiation factor  35.67 
 
 
353 aa  142  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  0.646058  normal 
 
 
-
 
NC_007413  Ava_3544  methylthioribose-1-phosphate isomerase  31.21 
 
 
347 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3765  translation initiation factor, aIF-2BI family  32.54 
 
 
345 aa  141  1.9999999999999998e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0692423  n/a   
 
 
-
 
NC_011658  BCAH187_A0441  methylthioribose-1-phosphate isomerase  31.45 
 
 
348 aa  140  3.9999999999999997e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0648  aIF-2BI family translation initiation factor  34.64 
 
 
348 aa  139  7e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.674044  n/a   
 
 
-
 
NC_011725  BCB4264_A0394  methylthioribose-1-phosphate isomerase  36.57 
 
 
348 aa  139  7e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2613  translation initiation factor, aIF-2BI family  27.38 
 
 
349 aa  138  1e-31  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0072  translation initiation factor 2B subunit I  32.73 
 
 
346 aa  137  2e-31  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.25912 
 
 
-
 
NC_011761  AFE_0893  translation initiation factor, putative, aIF-2BI family  33.96 
 
 
350 aa  137  2e-31  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.592347  n/a   
 
 
-
 
NC_011206  Lferr_1015  translation initiation factor, aIF-2BI family  33.96 
 
 
350 aa  137  2e-31  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.253315  unclonable  0.0000000000388932 
 
 
-
 
NC_013205  Aaci_1646  translation initiation factor, aIF-2BI family  35.6 
 
 
340 aa  137  3.0000000000000003e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0846  methylthioribose-1-phosphate isomerase  30.79 
 
 
356 aa  137  3.0000000000000003e-31  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3596  translation initiation factor, aIF-2BI family  31.99 
 
 
346 aa  137  3.0000000000000003e-31  Geobacter lovleyi SZ  Bacteria  normal  0.82629  n/a   
 
 
-
 
NC_009483  Gura_4322  aIF-2BI family translation initiation factor  31.19 
 
 
346 aa  137  3.0000000000000003e-31  Geobacter uraniireducens Rf4  Bacteria  normal  0.394096  n/a   
 
 
-
 
NC_007484  Noc_2293  initiation factor 2B alpha/beta/delta  33.43 
 
 
348 aa  136  5e-31  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1400  translation initiation factor, aIF-2BI family  44.12 
 
 
354 aa  136  5e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.0211329  normal 
 
 
-
 
NC_011729  PCC7424_4687  methylthioribose-1-phosphate isomerase  29.91 
 
 
350 aa  136  6.0000000000000005e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_1881  aIF-2BI family translation initiation factor  28.61 
 
 
345 aa  135  7.000000000000001e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0510  aIF-2BI family translation initiation factor  38 
 
 
346 aa  135  9.999999999999999e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0169  aIF-2BI family translation initiation factor  29.32 
 
 
345 aa  135  9.999999999999999e-31  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00178496 
 
 
-
 
NC_005957  BT9727_3774  methylthioribose-1-phosphate isomerase  29.12 
 
 
351 aa  134  1.9999999999999998e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0964  translation initiation factor, aIF-2BI family  41.79 
 
 
351 aa  134  1.9999999999999998e-30  Ammonifex degensii KC4  Bacteria  normal  0.518904  n/a   
 
 
-
 
NC_013411  GYMC61_1741  methylthioribose-1-phosphate isomerase  40.3 
 
 
355 aa  134  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_4053  methylthioribose-1-phosphate isomerase  29.12 
 
 
351 aa  134  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013926  Aboo_1543  translation initiation factor, aIF-2BI family  30.03 
 
 
333 aa  133  3.9999999999999996e-30  Aciduliprofundum boonei T469  Archaea  normal  0.0321135  n/a   
 
 
-
 
NC_002936  DET0518  aIF-2BI family translation initiation factor  31.48 
 
 
334 aa  132  6e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  0.294825  n/a   
 
 
-
 
NC_005945  BAS3942  methylthioribose-1-phosphate isomerase  29.36 
 
 
351 aa  133  6e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4079  methylthioribose-1-phosphate isomerase  34.78 
 
 
358 aa  132  6e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.256868 
 
 
-
 
NC_007530  GBAA_4251  methylthioribose-1-phosphate isomerase  29.36 
 
 
351 aa  133  6e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0156  eIF-2B alpha/beta/delta-related uncharacterized protein  39.7 
 
 
354 aa  132  6e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.232234  normal 
 
 
-
 
NC_007498  Pcar_2170  aIF-2BI family translation initiation factor  38.79 
 
 
344 aa  132  9e-30  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00735  methylthioribose-1-phosphate isomerase  33.43 
 
 
354 aa  131  1.0000000000000001e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.214802  n/a   
 
 
-
 
NC_013552  DhcVS_459  methylthioribose-1-phosphate isomerase  31.48 
 
 
332 aa  132  1.0000000000000001e-29  Dehalococcoides sp. VS  Bacteria  normal  0.14852  n/a   
 
 
-
 
NC_008463  PA14_23250  methylthioribose-1-phosphate isomerase  33.92 
 
 
358 aa  132  1.0000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0078361 
 
 
-
 
NC_010730  SYO3AOP1_0676  translation initiation factor, aIF-2BI family  27.44 
 
 
339 aa  131  1.0000000000000001e-29  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0103604  n/a   
 
 
-
 
NC_012560  Avin_15800  methylthioribose-1-phosphate isomerase  35.14 
 
 
358 aa  132  1.0000000000000001e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18480  putative translation initiation factor, aIF-2BI family  29.38 
 
 
355 aa  131  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  normal  0.0224403  n/a   
 
 
-
 
NC_010718  Nther_0419  translation initiation factor 2B subunit I family (IF-2BI)  27.79 
 
 
347 aa  131  2.0000000000000002e-29  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.04546  normal 
 
 
-
 
NC_009073  Pcal_2173  translation initiation factor IF-2B subunit alpha  33.14 
 
 
366 aa  131  2.0000000000000002e-29  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_012917  PC1_3300  translation initiation factor, aIF-2BI family  32.08 
 
 
342 aa  130  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1289  methylthioribose-1-phosphate isomerase  29.82 
 
 
364 aa  130  4.0000000000000003e-29  Clostridium cellulolyticum H10  Bacteria  normal  0.0889723  n/a   
 
 
-
 
NC_011071  Smal_2579  methylthioribose-1-phosphate isomerase  33.13 
 
 
354 aa  130  4.0000000000000003e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2078  methylthioribose-1-phosphate isomerase  27.86 
 
 
353 aa  130  4.0000000000000003e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.424406 
 
 
-
 
NC_014248  Aazo_1643  translation initiation factor  28.99 
 
 
344 aa  129  6e-29  'Nostoc azollae' 0708  Bacteria  normal  0.226672  n/a   
 
 
-
 
NC_006274  BCZK3789  methylthioribose-1-phosphate isomerase  28.82 
 
 
351 aa  129  6e-29  Bacillus cereus E33L  Bacteria  normal  0.700016  n/a   
 
 
-
 
NC_011146  Gbem_3646  translation initiation factor, aIF-2BI family  36.5 
 
 
346 aa  129  7.000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1960  methylthioribose-1-phosphate isomerase  33.72 
 
 
358 aa  129  8.000000000000001e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4159  methylthioribose-1-phosphate isomerase  28.53 
 
 
351 aa  128  1.0000000000000001e-28  Bacillus cereus AH187  Bacteria  normal  0.109098  n/a   
 
 
-
 
NC_012918  GM21_3753  translation initiation factor, aIF-2BI family  36.5 
 
 
346 aa  128  1.0000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009361  OSTLU_35743  predicted protein  44.87 
 
 
365 aa  127  2.0000000000000002e-28  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.260094 
 
 
-
 
NC_003909  BCE_4098  methylthioribose-1-phosphate isomerase  28.78 
 
 
351 aa  127  3e-28  Bacillus cereus ATCC 10987  Bacteria  normal  0.463174  n/a   
 
 
-
 
NC_009674  Bcer98_2731  methylthioribose-1-phosphate isomerase  38.81 
 
 
349 aa  127  3e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0228866  n/a   
 
 
-
 
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