Gene Pfl01_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4079 
SymbolmtnA 
ID3712324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4610773 
End bp4611849 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content63% 
IMG OID 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_349807 
Protein GI77460300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.256868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC GACTGTTGGC TGCGGAGAAA GTAAAGGCCA TCGATTGGCG TGATGGCGCG 
CTCCACCTGC TGGATCAGCG CGTTTTGCCG TTCGAGGAAA ACTGGATCGC CTACACCAGC
GCCGCCGGCG TGGCCGAAGC GATTCGTTCG ATGGTGGTGC GCGGTGCGCC GGCCATCGGC
ATCAGTGCCG CCTACGGCAT CGTACTGGCG GCCCGTGCCC GGATTGCCGA GGGGGGCGAC
TGGTATGCGG CGCTGGAAGA GGATTTCATG CTGCTGGCCG ATTCCCGGCC GACAGCGGTC
AACCTGTTCT GGGCGTTGAA TCGCATGCAT GACCGGCTGG ACCGCTTGAA GGAAAACGCC
GATCCGCTGG CGGCGCTGGA AGCCGAAGCC ATCGCTATCC ATGAAAGCGA TCGTGAAGCC
AACCTGACCA TGGCCCAGCT CGGCGTCGAC CTGATCCGCA AGCATCAGGG CAATGCCCAG
GCGATTCTGA CTCACTGCAA CACCGGCGCC CTGGCCACTG GCGGTTTCGG CACGGCACTC
GGGGTGATTC GCGCAGCGTT CATCGAGGGC ATGGTCGAGC GTGTCTACGC CGACGAAACC
CGGCCGTGGC TGCAAGGCTC GCGGCTGACC GCGTGGGAGC TGGCCAACGA AGGCATTCCG
GTGACCCTGA ACGCTGACTC CGCCGCTGCG CACATCATGA AAACCAAAGG GGTGACCTGG
GTGATCGTCG GCGCCGACCG GATTACCGCC AACGGTGACG TGGCGAACAA GATCGGCACC
TATCAACTGG CGGTCAACGC CATGCACCAC GGCGTGCGTT TCATGGTGGT AGCACCGAGT
TCGACCATCG ACATGAATCT GGCCAGCGGT GATGACATCC CGATCGAAGA GCGCGACGGC
GCCGAGTTGC TGGAGGTTGG CGGCAAGCGT GTCGGGGCTG ACGTTGAGGC GTTCAACCCG
GTGTTTGACG TGACCCCGGC GGATCTGATC GATGCGATCG TCACCGAAAA AGGCATCGTC
GAGCGCCCGG ACACCGCGAA AATGGCGCAG TTGATGTGCC GCAAGCGCTT GCATTGA
 
Protein sequence
MRDRLLAAEK VKAIDWRDGA LHLLDQRVLP FEENWIAYTS AAGVAEAIRS MVVRGAPAIG 
ISAAYGIVLA ARARIAEGGD WYAALEEDFM LLADSRPTAV NLFWALNRMH DRLDRLKENA
DPLAALEAEA IAIHESDREA NLTMAQLGVD LIRKHQGNAQ AILTHCNTGA LATGGFGTAL
GVIRAAFIEG MVERVYADET RPWLQGSRLT AWELANEGIP VTLNADSAAA HIMKTKGVTW
VIVGADRITA NGDVANKIGT YQLAVNAMHH GVRFMVVAPS STIDMNLASG DDIPIEERDG
AELLEVGGKR VGADVEAFNP VFDVTPADLI DAIVTEKGIV ERPDTAKMAQ LMCRKRLH