More than 300 homologs were found in PanDaTox collection
for query gene A2cp1_2681 on replicon NC_011891
Organism: Anaeromyxobacter dehalogenans 2CP-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011891  A2cp1_2681  cold-shock DNA-binding domain protein  100 
 
 
67 aa  135  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0114675  n/a   
 
 
-
 
NC_007760  Adeh_1274  cold-shock DNA-binding protein family protein  100 
 
 
67 aa  135  2e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2588  cold-shock DNA-binding domain protein  100 
 
 
67 aa  135  2e-31  Anaeromyxobacter sp. K  Bacteria  normal  0.110334  n/a   
 
 
-
 
NC_009675  Anae109_2494  cold-shock DNA-binding domain-containing protein  87.69 
 
 
67 aa  121  3e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.170049  decreased coverage  0.000196654 
 
 
-
 
NC_011891  A2cp1_3366  cold-shock DNA-binding domain protein  87.69 
 
 
67 aa  120  7e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3292  cold-shock DNA-binding domain protein  86.15 
 
 
67 aa  119  9.999999999999999e-27  Anaeromyxobacter sp. K  Bacteria  hitchhiker  0.0070619  n/a   
 
 
-
 
NC_007760  Adeh_3176  cold-shock DNA-binding protein family protein  86.15 
 
 
67 aa  118  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1049  cold-shock DNA-binding domain protein  81.54 
 
 
67 aa  116  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0988  cold-shock DNA-binding protein family protein  81.54 
 
 
67 aa  116  9.999999999999999e-26  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4117  cold-shock DNA-binding domain-containing protein  81.54 
 
 
67 aa  116  9.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.327381  normal  0.21845 
 
 
-
 
NC_011145  AnaeK_1045  cold-shock DNA-binding domain protein  81.54 
 
 
67 aa  116  9.999999999999999e-26  Anaeromyxobacter sp. K  Bacteria  normal  0.396466  n/a   
 
 
-
 
NC_009675  Anae109_4042  cold-shock DNA-binding domain-containing protein  81.54 
 
 
67 aa  115  1.9999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0273  cold-shock DNA-binding domain-containing protein  78.46 
 
 
67 aa  110  7.000000000000001e-24  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.355642 
 
 
-
 
NC_011145  AnaeK_0262  cold-shock DNA-binding domain protein  78.46 
 
 
67 aa  110  8.000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0252  cold-shock DNA-binding protein family protein  78.46 
 
 
67 aa  110  8.000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.994476  n/a   
 
 
-
 
NC_011891  A2cp1_0273  cold-shock DNA-binding domain protein  78.46 
 
 
67 aa  110  8.000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2532  cold-shock DNA-binding domain-containing protein  81.54 
 
 
65 aa  109  1.0000000000000001e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.19716  normal  0.287944 
 
 
-
 
NC_011891  A2cp1_2724  cold-shock DNA-binding domain protein  80 
 
 
66 aa  107  5e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.720009  n/a   
 
 
-
 
NC_007760  Adeh_1235  cold-shock DNA-binding protein family protein  80 
 
 
66 aa  107  5e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2630  cold-shock DNA-binding domain protein  80 
 
 
66 aa  107  5e-23  Anaeromyxobacter sp. K  Bacteria  normal  0.681724  n/a   
 
 
-
 
NC_008699  Noca_2869  cold-shock DNA-binding protein family protein  76.92 
 
 
67 aa  105  2e-22  Nocardioides sp. JS614  Bacteria  normal  0.0181409  n/a   
 
 
-
 
NC_010084  Bmul_2894  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  4e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0694911  normal  0.905374 
 
 
-
 
NC_007510  Bcep18194_A3591  cold-shock DNA-binding protein family protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia sp. 383  Bacteria  normal  normal  0.724551 
 
 
-
 
NC_008060  Bcen_2602  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0673828  n/a   
 
 
-
 
NC_010508  Bcenmc03_0476  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.528893 
 
 
-
 
NC_010551  BamMC406_0434  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.157399  normal  0.399503 
 
 
-
 
NC_008390  Bamb_0408  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia ambifaria AMMD  Bacteria  normal  0.125835  n/a   
 
 
-
 
NC_008542  Bcen2424_0503  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  104  5e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2791  cold-shock domain-contain protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  0.827238  n/a   
 
 
-
 
NC_009074  BURPS668_3598  CspE-related protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia pseudomallei 668  Bacteria  normal  0.164204  n/a   
 
 
-
 
NC_007434  BURPS1710b_3609  cold shock transcription regulator protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2936  cold-shock domain-contain protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1750  cold-shock domain-contain protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3184  cold-shock domain-contain protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3622  cold-shock domain-contain protein  70.77 
 
 
67 aa  103  9e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5169  cold-shock DNA-binding domain-containing protein  70.15 
 
 
67 aa  101  3e-21  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2426  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  100  5e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.386206  normal  0.184038 
 
 
-
 
NC_003296  RSp1053  cold shock-like transcription regulator protein  65.67 
 
 
67 aa  99.4  1e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.470883  normal 
 
 
-
 
NC_010681  Bphyt_3528  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  99.8  1e-20  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00720053  normal  0.332876 
 
 
-
 
NC_011662  Tmz1t_1681  cold-shock DNA-binding domain protein  71.43 
 
 
69 aa  99.8  1e-20  Thauera sp. MZ1T  Bacteria  normal  0.248337  n/a   
 
 
-
 
NC_007951  Bxe_A0430  cold-shock DNA-binding protein family protein  69.23 
 
 
67 aa  99.8  1e-20  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000180464  normal 
 
 
-
 
NC_010627  Bphy_7382  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  99.4  1e-20  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0708981 
 
 
-
 
NC_007348  Reut_B5340  cold-shock DNA-binding protein family protein  70.31 
 
 
83 aa  99  2e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0679  cold-shock DNA-binding protein family protein  69.23 
 
 
68 aa  99  2e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.233328  normal  0.774201 
 
 
-
 
NC_013131  Caci_1466  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  99  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00122582  normal 
 
 
-
 
NC_010676  Bphyt_6907  cold-shock DNA-binding domain protein  67.16 
 
 
67 aa  98.2  3e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.240211  normal  0.394944 
 
 
-
 
NC_007952  Bxe_B2951  cold-shock DNA-binding protein family protein  67.16 
 
 
77 aa  98.6  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.15288  normal 
 
 
-
 
NC_008009  Acid345_1894  cold-shock DNA-binding protein family protein  76.92 
 
 
66 aa  98.6  3e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  hitchhiker  0.00218073  hitchhiker  0.000840233 
 
 
-
 
NC_007951  Bxe_A2061  cold-shock DNA-binding protein family protein  66.15 
 
 
67 aa  97.8  4e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.131927 
 
 
-
 
NC_010681  Bphyt_2202  cold-shock DNA-binding domain protein  66.15 
 
 
67 aa  97.8  4e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5816  major cold shock protein  68.75 
 
 
67 aa  97.8  4e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1374  cold-shock DNA-binding domain protein  64.18 
 
 
67 aa  98.2  4e-20  Thauera sp. MZ1T  Bacteria  normal  0.287556  n/a   
 
 
-
 
NC_007298  Daro_1388  cold-shock DNA-binding protein family protein  64.62 
 
 
67 aa  97.4  5e-20  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.0000000000000202704  normal  0.239262 
 
 
-
 
NC_007947  Mfla_2140  cold-shock DNA-binding protein family protein  64.18 
 
 
67 aa  97.4  5e-20  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.000000000648799  normal 
 
 
-
 
NC_012857  Rpic12D_4386  cold-shock DNA-binding domain protein  68.75 
 
 
67 aa  97.8  5e-20  Ralstonia pickettii 12D  Bacteria  normal  normal  0.490734 
 
 
-
 
NC_010678  Rpic_4276  cold-shock DNA-binding domain protein  68.75 
 
 
67 aa  97.8  5e-20  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0590  cold-shock protein  68.66 
 
 
67 aa  97.4  6e-20  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  hitchhiker  0.000832642  n/a   
 
 
-
 
NC_011206  Lferr_0742  cold-shock DNA-binding domain protein  68.66 
 
 
67 aa  97.4  6e-20  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  0.0000000000219995  unclonable  0.0000000000274746 
 
 
-
 
NC_007963  Csal_2503  cold-shock DNA-binding protein family protein  66.15 
 
 
68 aa  97.4  6e-20  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00000079429  n/a   
 
 
-
 
NC_009483  Gura_4380  cold-shock DNA-binding domain-containing protein  72.31 
 
 
66 aa  97.1  7e-20  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000149248  n/a   
 
 
-
 
NC_007963  Csal_1668  cold-shock DNA-binding protein family protein  65.67 
 
 
67 aa  97.1  7e-20  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.0000281076  n/a   
 
 
-
 
NC_010622  Bphy_0567  cold-shock DNA-binding domain-containing protein  65.67 
 
 
68 aa  97.1  7e-20  Burkholderia phymatum STM815  Bacteria  unclonable  0.0000000000101913  hitchhiker  0.000143899 
 
 
-
 
NC_011901  Tgr7_0507  cold-shock DNA-binding domain protein  65.67 
 
 
67 aa  97.1  8e-20  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.804223  n/a   
 
 
-
 
NC_010622  Bphy_2727  cold-shock DNA-binding domain-containing protein  64.18 
 
 
67 aa  96.7  9e-20  Burkholderia phymatum STM815  Bacteria  normal  0.312449  normal 
 
 
-
 
NC_007336  Reut_C6028  cold-shock DNA-binding protein family protein  66.15 
 
 
67 aa  96.7  1e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0855  cold-shock DNA-binding protein family protein  66.15 
 
 
68 aa  96.3  1e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.563444  normal  0.445485 
 
 
-
 
NC_011071  Smal_2965  cold-shock DNA-binding domain protein  65.67 
 
 
68 aa  96.3  1e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  hitchhiker  0.0000138264 
 
 
-
 
NC_010717  PXO_01731  hypothetical protein  67.19 
 
 
68 aa  95.5  2e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26130  cold-shock DNA-binding protein family  70.31 
 
 
67 aa  95.9  2e-19  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2466  cold shock-like transcription regulator protein  65.67 
 
 
67 aa  95.5  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.4868  normal 
 
 
-
 
NC_006348  BMA2279  cold-shock domain-contain protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.000000000750079  n/a   
 
 
-
 
NC_007333  Tfu_0384  cold-shock DNA-binding protein family protein  69.23 
 
 
67 aa  95.5  2e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6014  cold-shock DNA-binding protein family protein  64.62 
 
 
67 aa  95.5  2e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1112  cold shock transcription regulator protein  64.18 
 
 
81 aa  95.9  2e-19  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000000170415  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0574  cold-shock domain-contain protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000000000000358394  n/a   
 
 
-
 
NC_009080  BMA10247_2156  cold-shock domain-contain protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00000351487  n/a   
 
 
-
 
NC_010681  Bphyt_3078  cold-shock DNA-binding domain protein  68.75 
 
 
67 aa  95.5  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0775  cold-shock DNA-binding domain-containing protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia multivorans ATCC 17616  Bacteria  decreased coverage  0.0000000000150831  hitchhiker  0.000000000149768 
 
 
-
 
NC_007517  Gmet_0237  cold-shock DNA-binding protein family protein  71.88 
 
 
66 aa  95.9  2e-19  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000692047  hitchhiker  0.0000000000000296416 
 
 
-
 
NC_010681  Bphyt_3167  cold-shock DNA-binding domain protein  66.15 
 
 
68 aa  95.5  2e-19  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000000493488  hitchhiker  0.00220171 
 
 
-
 
NC_009076  BURPS1106A_0962  cold shock protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.000153995  n/a   
 
 
-
 
NC_007614  Nmul_A2246  cold-shock DNA-binding domain-containing protein  62.69 
 
 
67 aa  95.9  2e-19  Nitrosospira multiformis ATCC 25196  Bacteria  decreased coverage  0.000000157436  n/a   
 
 
-
 
NC_007651  BTH_I0761  cold-shock domain-contain protein  64.18 
 
 
81 aa  95.9  2e-19  Burkholderia thailandensis E264  Bacteria  unclonable  0.00000000000025188  n/a   
 
 
-
 
NC_007951  Bxe_A0798  cold-shock DNA-binding protein family protein  66.15 
 
 
68 aa  95.5  2e-19  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000000000000106482  normal 
 
 
-
 
NC_009664  Krad_3637  putative cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  95.5  2e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1267  cold-shock DNA-binding domain protein  67.19 
 
 
67 aa  95.5  2e-19  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.922504  n/a   
 
 
-
 
NC_013093  Amir_0220  cold-shock DNA-binding domain protein  70.15 
 
 
67 aa  95.5  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1051  cold-shock domain-contain protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000000000117316  n/a   
 
 
-
 
NC_010551  BamMC406_2438  cold-shock DNA-binding domain-containing protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia ambifaria MC40-6  Bacteria  unclonable  0.00000000000180609  unclonable  0.0000000000176576 
 
 
-
 
NC_009074  BURPS668_0958  cold shock protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000117939  n/a   
 
 
-
 
NC_010623  Bphy_4995  cold-shock DNA-binding domain-containing protein  63.08 
 
 
67 aa  95.9  2e-19  Burkholderia phymatum STM815  Bacteria  normal  0.833631  normal 
 
 
-
 
NC_008390  Bamb_2568  cold-shock DNA-binding domain-containing protein  64.18 
 
 
67 aa  95.5  2e-19  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.000000063088  n/a   
 
 
-
 
NC_010623  Bphy_5269  cold-shock DNA-binding domain-containing protein  67.19 
 
 
67 aa  95.5  2e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0859722 
 
 
-
 
NC_008699  Noca_4269  cold-shock DNA-binding protein family protein  66.15 
 
 
67 aa  95.1  3e-19  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3041  cold shock transcription regulator protein  66.15 
 
 
67 aa  95.1  3e-19  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000233724  n/a   
 
 
-
 
NC_007651  BTH_I1594  cold-shock domain-contain protein  66.15 
 
 
67 aa  95.1  3e-19  Burkholderia thailandensis E264  Bacteria  unclonable  0.000000000000225603  n/a   
 
 
-
 
NC_009074  BURPS668_2941  cold-shock domain-contain protein  66.15 
 
 
67 aa  95.1  3e-19  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000529081  n/a   
 
 
-
 
NC_007951  Bxe_A0913  cold-shock DNA-binding protein family protein  66.15 
 
 
67 aa  95.1  3e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.587921  normal 
 
 
-
 
NC_009076  BURPS1106A_3007  cold-shock domain-contain protein  66.15 
 
 
67 aa  95.1  3e-19  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000126299  n/a   
 
 
-
 
NC_009483  Gura_3711  cold-shock DNA-binding domain-containing protein  72.31 
 
 
66 aa  95.1  3e-19  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000509741  n/a   
 
 
-
 
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