Gene Bphyt_6907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6907 
Symbol 
ID6279407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3273280 
End bp3273483 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content54% 
IMG OID642617934 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_001890570 
Protein GI187921538 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.240211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.394944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAG GTACTGTGAA GTGGTTTAAC GATGCAAAGG GCTTTGGCTT CATCACGCCG 
GACGACGGCG GCGAAGACCT GTTCGCGCAC TTTTCGGAAG TTCAAGGCAG CGGCTTCAAG
TCCCTGCAGG AAAACCAAAA GGTGACGTTT GAAGTTAAGC AAGGCCCGAA GGGCAAGCAA
GCTGCGAACA TCCAGCCGGC CTAA
 
Protein sequence
MATGTVKWFN DAKGFGFITP DDGGEDLFAH FSEVQGSGFK SLQENQKVTF EVKQGPKGKQ 
AANIQPA