More than 300 homologs were found in PanDaTox collection
for query gene Bcep18194_A3591 on replicon NC_007510
Organism: Burkholderia sp. 383



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010508  Bcenmc03_0476  cold-shock DNA-binding domain-containing protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.528893 
 
 
-
 
NC_007510  Bcep18194_A3591  cold-shock DNA-binding protein family protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia sp. 383  Bacteria  normal  normal  0.724551 
 
 
-
 
NC_010551  BamMC406_0434  cold-shock DNA-binding domain-containing protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.157399  normal  0.399503 
 
 
-
 
NC_008060  Bcen_2602  cold-shock DNA-binding domain-containing protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0673828  n/a   
 
 
-
 
NC_008390  Bamb_0408  cold-shock DNA-binding domain-containing protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.125835  n/a   
 
 
-
 
NC_008542  Bcen2424_0503  cold-shock DNA-binding domain-containing protein  100 
 
 
67 aa  137  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2894  cold-shock DNA-binding domain-containing protein  98.51 
 
 
67 aa  136  8.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0694911  normal  0.905374 
 
 
-
 
NC_006348  BMA2791  cold-shock domain-contain protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.827238  n/a   
 
 
-
 
NC_009074  BURPS668_3598  CspE-related protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.164204  n/a   
 
 
-
 
NC_007434  BURPS1710b_3609  cold shock transcription regulator protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3622  cold-shock domain-contain protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2936  cold-shock domain-contain protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1750  cold-shock domain-contain protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3184  cold-shock domain-contain protein  94.03 
 
 
67 aa  132  1.9999999999999998e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3528  cold-shock DNA-binding domain protein  89.55 
 
 
67 aa  124  3e-28  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00720053  normal  0.332876 
 
 
-
 
NC_007951  Bxe_A0430  cold-shock DNA-binding protein family protein  89.55 
 
 
67 aa  124  3e-28  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000180464  normal 
 
 
-
 
NC_011662  Tmz1t_1681  cold-shock DNA-binding domain protein  89.23 
 
 
69 aa  123  8.000000000000001e-28  Thauera sp. MZ1T  Bacteria  normal  0.248337  n/a   
 
 
-
 
NC_010622  Bphy_2727  cold-shock DNA-binding domain-containing protein  85.07 
 
 
67 aa  121  3e-27  Burkholderia phymatum STM815  Bacteria  normal  0.312449  normal 
 
 
-
 
NC_010623  Bphy_5169  cold-shock DNA-binding domain-containing protein  85.07 
 
 
67 aa  120  5e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7382  cold-shock DNA-binding domain-containing protein  83.58 
 
 
67 aa  119  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0708981 
 
 
-
 
NC_007348  Reut_B5340  cold-shock DNA-binding protein family protein  82.09 
 
 
83 aa  118  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_5269  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  117  4.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0859722 
 
 
-
 
NC_010681  Bphyt_2202  cold-shock DNA-binding domain protein  82.09 
 
 
67 aa  117  4.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2061  cold-shock DNA-binding protein family protein  82.09 
 
 
67 aa  117  4.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.131927 
 
 
-
 
NC_007511  Bcep18194_B1151  cold-shock DNA-binding protein family protein  80.6 
 
 
67 aa  116  7.999999999999999e-26  Burkholderia sp. 383  Bacteria  normal  0.0114699  normal  0.306384 
 
 
-
 
NC_010552  BamMC406_4522  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  116  7.999999999999999e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.044588  normal  0.193224 
 
 
-
 
NC_008391  Bamb_4064  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  116  7.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.325578  normal  0.535982 
 
 
-
 
NC_006349  BMAA0899  cold-shock domain-contain protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1853  cold-shock domain-contain protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.537737  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0388  cold shock transcription regulator protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1944  hypothetical protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5816  major cold shock protein  79.1 
 
 
67 aa  116  9e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0167  cold-shock domain-contain protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0482  cold-shock domain-contain protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1442  cold-shock domain-contain protein  80.6 
 
 
67 aa  116  9e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5888  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  116  9.999999999999999e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.232235  normal  0.225892 
 
 
-
 
NC_010512  Bcenmc03_6397  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  116  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.257839 
 
 
-
 
NC_008062  Bcen_5524  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  116  9.999999999999999e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.337597  n/a   
 
 
-
 
NC_007650  BTH_II1002  cold-shock domain-contain protein  79.1 
 
 
67 aa  115  1.9999999999999998e-25  Burkholderia thailandensis E264  Bacteria  normal  0.229308  n/a   
 
 
-
 
NC_007951  Bxe_A2596  cold-shock DNA-binding protein family protein  80.3 
 
 
67 aa  114  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.111063  normal 
 
 
-
 
NC_010676  Bphyt_6765  cold-shock DNA-binding domain protein  80.6 
 
 
67 aa  114  3.9999999999999997e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.929729  normal  0.307986 
 
 
-
 
NC_007952  Bxe_B2780  cold-shock DNA-binding protein family protein  80.6 
 
 
67 aa  114  3.9999999999999997e-25  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00000626517  normal 
 
 
-
 
NC_010623  Bphy_4995  cold-shock DNA-binding domain-containing protein  80.6 
 
 
67 aa  114  5e-25  Burkholderia phymatum STM815  Bacteria  normal  0.833631  normal 
 
 
-
 
NC_007952  Bxe_B2951  cold-shock DNA-binding protein family protein  80.6 
 
 
77 aa  114  5e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.15288  normal 
 
 
-
 
NC_010676  Bphyt_6907  cold-shock DNA-binding domain protein  80.6 
 
 
67 aa  114  5e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.240211  normal  0.394944 
 
 
-
 
NC_009074  BURPS668_2941  cold-shock domain-contain protein  79.1 
 
 
67 aa  112  1.0000000000000001e-24  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000529081  n/a   
 
 
-
 
NC_007434  BURPS1710b_3041  cold shock transcription regulator protein  79.1 
 
 
67 aa  112  1.0000000000000001e-24  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000233724  n/a   
 
 
-
 
NC_007651  BTH_I1594  cold-shock domain-contain protein  79.1 
 
 
67 aa  112  1.0000000000000001e-24  Burkholderia thailandensis E264  Bacteria  unclonable  0.000000000000225603  n/a   
 
 
-
 
NC_009076  BURPS1106A_3007  cold-shock domain-contain protein  79.1 
 
 
67 aa  112  1.0000000000000001e-24  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000126299  n/a   
 
 
-
 
NC_010557  BamMC406_5581  cold-shock DNA-binding domain-containing protein  79.1 
 
 
67 aa  112  1.0000000000000001e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_1668  cold-shock DNA-binding protein family protein  77.61 
 
 
67 aa  112  1.0000000000000001e-24  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.0000281076  n/a   
 
 
-
 
NC_007336  Reut_C6028  cold-shock DNA-binding protein family protein  79.1 
 
 
67 aa  112  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5764  cold-shock DNA-binding domain-containing protein  78.79 
 
 
170 aa  112  2.0000000000000002e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.008002 
 
 
-
 
NC_007298  Daro_1388  cold-shock DNA-binding protein family protein  77.61 
 
 
67 aa  111  3e-24  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.0000000000000202704  normal  0.239262 
 
 
-
 
NC_008392  Bamb_5798  cold-shock DNA-binding domain-containing protein  79.1 
 
 
67 aa  111  3e-24  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.992183 
 
 
-
 
NC_007336  Reut_C6014  cold-shock DNA-binding protein family protein  77.61 
 
 
67 aa  111  4.0000000000000004e-24  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3078  cold-shock DNA-binding domain protein  76.12 
 
 
67 aa  110  5e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0877  cold-shock DNA-binding domain-containing protein  77.61 
 
 
67 aa  110  6e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.351907  normal 
 
 
-
 
NC_008390  Bamb_0865  cold-shock DNA-binding domain-containing protein  77.61 
 
 
67 aa  110  6e-24  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.0000000217633  n/a   
 
 
-
 
NC_010086  Bmul_4166  cold-shock DNA-binding domain-containing protein  76.12 
 
 
67 aa  110  7.000000000000001e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.745487  normal 
 
 
-
 
NC_007951  Bxe_A0913  cold-shock DNA-binding protein family protein  74.63 
 
 
67 aa  110  8.000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  0.587921  normal 
 
 
-
 
NC_008061  Bcen_5095  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  110  8.000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_3782  cold-shock DNA-binding domain protein  78.79 
 
 
67 aa  109  1.0000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  0.0399631  normal  0.208523 
 
 
-
 
NC_012857  Rpic12D_3895  cold-shock DNA-binding domain protein  78.79 
 
 
67 aa  109  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1374  cold-shock DNA-binding domain protein  78.46 
 
 
67 aa  109  1.0000000000000001e-23  Thauera sp. MZ1T  Bacteria  normal  0.287556  n/a   
 
 
-
 
NC_008060  Bcen_0527  cold-shock DNA-binding domain-containing protein  76.12 
 
 
67 aa  109  1.0000000000000001e-23  Burkholderia cenocepacia AU 1054  Bacteria  unclonable  0.0000000000967156  n/a   
 
 
-
 
NC_010515  Bcenmc03_4409  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  109  1.0000000000000001e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1005  cold-shock DNA-binding domain-containing protein  76.12 
 
 
67 aa  109  1.0000000000000001e-23  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000000000138361  n/a   
 
 
-
 
NC_010508  Bcenmc03_0965  cold-shock DNA-binding domain-containing protein  76.12 
 
 
67 aa  109  1.0000000000000001e-23  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.00000000000119944  normal  0.392298 
 
 
-
 
NC_007404  Tbd_0679  cold-shock DNA-binding protein family protein  76.12 
 
 
68 aa  108  2.0000000000000002e-23  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.233328  normal  0.774201 
 
 
-
 
NC_007963  Csal_2503  cold-shock DNA-binding protein family protein  74.63 
 
 
68 aa  108  2.0000000000000002e-23  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.00000079429  n/a   
 
 
-
 
NC_010622  Bphy_0676  cold-shock DNA-binding domain-containing protein  73.13 
 
 
67 aa  108  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.197262  normal  0.753603 
 
 
-
 
NC_010084  Bmul_2393  cold-shock DNA-binding domain-containing protein  74.63 
 
 
67 aa  108  2.0000000000000002e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5838  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  108  3e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.284132  normal 
 
 
-
 
NC_003296  RSp0002  cold shock-like transcription regulator protein  77.27 
 
 
67 aa  108  3e-23  Ralstonia solanacearum GMI1000  Bacteria  unclonable  0.0000000106276  normal 
 
 
-
 
NC_009675  Anae109_2494  cold-shock DNA-binding domain-containing protein  71.64 
 
 
67 aa  108  3e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.170049  decreased coverage  0.000196654 
 
 
-
 
NC_007510  Bcep18194_A4113  cold-shock DNA-binding protein family protein  74.63 
 
 
67 aa  108  3e-23  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000000000103179  normal  0.421912 
 
 
-
 
NC_007511  Bcep18194_B1449  cold-shock DNA-binding protein family protein  78.79 
 
 
67 aa  108  3e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4464  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  108  3e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3904  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  108  3e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4361  cold-shock DNA-binding domain-containing protein  77.27 
 
 
67 aa  107  4.0000000000000004e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3900  cold-shock DNA-binding domain-containing protein  77.27 
 
 
67 aa  107  4.0000000000000004e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.878106  normal 
 
 
-
 
NC_009675  Anae109_4117  cold-shock DNA-binding domain-containing protein  71.64 
 
 
67 aa  107  7.000000000000001e-23  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.327381  normal  0.21845 
 
 
-
 
NC_011891  A2cp1_3366  cold-shock DNA-binding domain protein  71.64 
 
 
67 aa  107  7.000000000000001e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0988  cold-shock DNA-binding protein family protein  71.64 
 
 
67 aa  106  1e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1045  cold-shock DNA-binding domain protein  71.64 
 
 
67 aa  106  1e-22  Anaeromyxobacter sp. K  Bacteria  normal  0.396466  n/a   
 
 
-
 
NC_011891  A2cp1_1049  cold-shock DNA-binding domain protein  71.64 
 
 
67 aa  106  1e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3292  cold-shock DNA-binding domain protein  71.64 
 
 
67 aa  105  2e-22  Anaeromyxobacter sp. K  Bacteria  hitchhiker  0.0070619  n/a   
 
 
-
 
NC_007404  Tbd_0855  cold-shock DNA-binding protein family protein  74.24 
 
 
68 aa  105  2e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.563444  normal  0.445485 
 
 
-
 
NC_007760  Adeh_3176  cold-shock DNA-binding protein family protein  70.15 
 
 
67 aa  105  2e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3392  cold-shock DNA-binding protein family protein  74.63 
 
 
68 aa  104  3e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0567  cold-shock DNA-binding domain-containing protein  74.63 
 
 
68 aa  105  3e-22  Burkholderia phymatum STM815  Bacteria  unclonable  0.0000000000101913  hitchhiker  0.000143899 
 
 
-
 
NC_012857  Rpic12D_4386  cold-shock DNA-binding domain protein  75.76 
 
 
67 aa  104  4e-22  Ralstonia pickettii 12D  Bacteria  normal  normal  0.490734 
 
 
-
 
NC_010678  Rpic_4276  cold-shock DNA-binding domain protein  75.76 
 
 
67 aa  104  4e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1053  cold shock-like transcription regulator protein  73.85 
 
 
67 aa  104  5e-22  Ralstonia solanacearum GMI1000  Bacteria  normal  0.470883  normal 
 
 
-
 
NC_011891  A2cp1_2681  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  104  5e-22  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0114675  n/a   
 
 
-
 
NC_007348  Reut_B5342  cold-shock DNA-binding protein family protein  73.13 
 
 
67 aa  104  5e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1274  cold-shock DNA-binding protein family protein  72.31 
 
 
67 aa  104  5e-22  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5818  cold-shock DNA-binding protein family  73.13 
 
 
67 aa  104  5e-22  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2588  cold-shock DNA-binding domain protein  72.31 
 
 
67 aa  104  5e-22  Anaeromyxobacter sp. K  Bacteria  normal  0.110334  n/a   
 
 
-
 
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