Gene RSp1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSp1053 
SymbolcspD2 
ID1223365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1334911 
End bp1335114 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content53% 
IMG OID637240918 
Productcold shock-like transcription regulator protein 
Protein accessionNP_522614 
Protein GI17549274 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.470883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG GTACCGTCAA GTGGTTCAAC GACGCTAAGG GTTTCGGCTT TATTACCCCG 
GATGAAGGCG GCGAGGACCT TTTCGCGCAT TTCTCTGCGA TCAACATGCA AGGGTTCAAG
ACCCTGAAGG AAGGTCAACG CGTTTCGTTT GAAATCACGC AAGGCCCGAA GGGCAAGCAA
GCCTCGAATA TCCAGGCGGC TTGA
 
Protein sequence
MATGTVKWFN DAKGFGFITP DEGGEDLFAH FSAINMQGFK TLKEGQRVSF EITQGPKGKQ 
ASNIQAA