Gene Bphyt_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3078 
Symbol 
ID6283821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3472245 
End bp3472448 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content54% 
IMG OID642622647 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_001896694 
Protein GI187925052 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG GTATCGTCAA ATGGTTCAAC GATGCTAAGG GCTTTGGCTT CATCACGTCG 
GATTCTGGCG GCGAAGATCT GTTCGCGCAC TTTTCGGAGA TTCGCGCGGA AGGCTTCAAA
TCGCTAAAGG AAAATCAGCG CGTTTCGTTC GACGTCAAGG CCGGCCCGAA GGGCAAGCAG
GCGGCGAACA TCCACCCGTT GTAA
 
Protein sequence
METGIVKWFN DAKGFGFITS DSGGEDLFAH FSEIRAEGFK SLKENQRVSF DVKAGPKGKQ 
AANIHPL