| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2466 |
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| Symbol | cspD |
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| ID | 1221313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2675412 |
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| End bp | 2675615 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637238867 |
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| Product | cold shock-like transcription regulator protein |
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| Protein accession | NP_520587 |
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| Protein GI | 17547185 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.4868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAACG GTACGGTCAA GTGGTTCAAC GACGCCAAGG GTTTTGGCTT CATCTCTCCC
GACGAGGGCG GCGAAGAGCT GTTCGCGCAT TTCTCGGCGA TCCAGATGAA CGGTTTCAAG
ACGCTCAAGG AAGGCCAGCG CGTCGCGTTC GACGTGACAC AGGGCCCGAA GGGCAAGCAG
GCCACCAACA TCCAGGCCGC CTGA
|
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| Protein sequence | MANGTVKWFN DAKGFGFISP DEGGEELFAH FSAIQMNGFK TLKEGQRVAF DVTQGPKGKQ
ATNIQAA
|
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| |